Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
CFAP43Q8NDM7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC35.1■■■■□ 3.21
CFAP43Q8NDM7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC35.1■■■■□ 3.21
CFAP43Q8NDM7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC35.1■■■■□ 3.21
CFAP43Q8NDM7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CFAP43Q8NDM7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC35.09■■■■□ 3.21
CFAP43Q8NDM7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CFAP43Q8NDM7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC35.09■■■■□ 3.21
CFAP43Q8NDM7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CFAP43Q8NDM7 GAS2L1P2-201ENST00000436355 1356 ntBASIC35.09■■■■□ 3.21
CFAP43Q8NDM7 LINC02228-203ENST00000641970 1355 ntBASIC35.09■■■■□ 3.21
CFAP43Q8NDM7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CFAP43Q8NDM7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC35.09■■■■□ 3.21
CFAP43Q8NDM7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 AL355802.2-201ENST00000402069 882 ntBASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 AC026185.1-201ENST00000445748 174 ntBASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CFAP43Q8NDM7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC35.07■■■■□ 3.21
CFAP43Q8NDM7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
CFAP43Q8NDM7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC35.07■■■■□ 3.2
CFAP43Q8NDM7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC35.07■■■■□ 3.2
CFAP43Q8NDM7 PPP1R14BP3-201ENST00000509033 445 ntBASIC35.07■■■■□ 3.2
CFAP43Q8NDM7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
CFAP43Q8NDM7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
CFAP43Q8NDM7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC35.06■■■■□ 3.2
CFAP43Q8NDM7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC35.06■■■■□ 3.2
CFAP43Q8NDM7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC35.06■■■■□ 3.2
CFAP43Q8NDM7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC35.05■■■■□ 3.2
CFAP43Q8NDM7 LINC01124-201ENST00000409786 2117 ntBASIC35.04■■■■□ 3.2
CFAP43Q8NDM7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC35.04■■■■□ 3.2
CFAP43Q8NDM7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC35.04■■■■□ 3.2
CFAP43Q8NDM7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC35.04■■■■□ 3.2
CFAP43Q8NDM7 AC137761.2-201ENST00000561729 223 ntBASIC35.04■■■■□ 3.2
CFAP43Q8NDM7 AC145350.3-201ENST00000569033 163 ntBASIC35.04■■■■□ 3.2
CFAP43Q8NDM7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
CFAP43Q8NDM7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC35.04■■■■□ 3.2
CFAP43Q8NDM7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC35.03■■■■□ 3.2
CFAP43Q8NDM7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CFAP43Q8NDM7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC35.03■■■■□ 3.2
CFAP43Q8NDM7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CFAP43Q8NDM7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
CFAP43Q8NDM7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 AL499627.2-201ENST00000606283 725 ntBASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
CFAP43Q8NDM7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 AC144652.1-201ENST00000609974 1624 ntBASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC35.01■■■■□ 3.2
CFAP43Q8NDM7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.19
CFAP43Q8NDM7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC35.01■■■■□ 3.19
CFAP43Q8NDM7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC35.01■■■■□ 3.19
CFAP43Q8NDM7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC35.01■■■■□ 3.19
CFAP43Q8NDM7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC35.01■■■■□ 3.19
CFAP43Q8NDM7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC35■■■■□ 3.19
CFAP43Q8NDM7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC35■■■■□ 3.19
CFAP43Q8NDM7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
CFAP43Q8NDM7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC35■■■■□ 3.19
CFAP43Q8NDM7 OR2I1P-207ENST00000453522 948 ntBASIC35■■■■□ 3.19
CFAP43Q8NDM7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC35■■■■□ 3.19
CFAP43Q8NDM7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 CROCCP5-201ENST00000436658 830 ntBASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC34.99■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms