Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SYNPOQ8N3V7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SYNPOQ8N3V7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SYNPOQ8N3V7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.62■■□□□ 1.21
SYNPOQ8N3V7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYNPOQ8N3V7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYNPOQ8N3V7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYNPOQ8N3V7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYNPOQ8N3V7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYNPOQ8N3V7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.61■■□□□ 1.21
SYNPOQ8N3V7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SYNPOQ8N3V7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.61■■□□□ 1.21
SYNPOQ8N3V7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.61■■□□□ 1.21
SYNPOQ8N3V7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.6■■□□□ 1.21
SYNPOQ8N3V7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.6■■□□□ 1.21
SYNPOQ8N3V7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYNPOQ8N3V7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SYNPOQ8N3V7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.6■■□□□ 1.21
SYNPOQ8N3V7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SYNPOQ8N3V7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYNPOQ8N3V7 AC138932.3-201ENST00000567634 1902 ntBASIC22.6■■□□□ 1.21
SYNPOQ8N3V7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SYNPOQ8N3V7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 LINC01529-204ENST00000636474 1715 ntBASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SYNPOQ8N3V7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 AP003733.4-201ENST00000623785 1697 ntBASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.58■■□□□ 1.21
SYNPOQ8N3V7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
SYNPOQ8N3V7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 AC006015.1-201ENST00000429970 570 ntBASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SYNPOQ8N3V7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 AC144652.1-201ENST00000609974 1624 ntBASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYNPOQ8N3V7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.55■■□□□ 1.2
SYNPOQ8N3V7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPOQ8N3V7 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.55■■□□□ 1.2
SYNPOQ8N3V7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPOQ8N3V7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPOQ8N3V7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SYNPOQ8N3V7 AC080038.1-201ENST00000611274 1154 ntBASIC22.55■■□□□ 1.2
SYNPOQ8N3V7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPOQ8N3V7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPOQ8N3V7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 AL139125.2-201ENST00000623134 1869 ntBASIC22.54■■□□□ 1.2
SYNPOQ8N3V7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYNPOQ8N3V7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms