Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.47■■□□□ 1.19
PGBD3Q8N328 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD3Q8N328 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD3Q8N328 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD3Q8N328 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.47■■□□□ 1.19
PGBD3Q8N328 FP325331.1-202ENST00000623531 1380 ntBASIC22.47■■□□□ 1.19
PGBD3Q8N328 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD3Q8N328 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.47■■□□□ 1.19
PGBD3Q8N328 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.46■■□□□ 1.19
PGBD3Q8N328 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.46■■□□□ 1.19
PGBD3Q8N328 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.46■■□□□ 1.19
PGBD3Q8N328 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PGBD3Q8N328 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.46■■□□□ 1.19
PGBD3Q8N328 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD3Q8N328 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PGBD3Q8N328 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD3Q8N328 AC004911.1-201ENST00000416316 871 ntBASIC22.45■■□□□ 1.18
PGBD3Q8N328 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD3Q8N328 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.45■■□□□ 1.18
PGBD3Q8N328 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD3Q8N328 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.45■■□□□ 1.18
PGBD3Q8N328 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD3Q8N328 CCDC92B-201ENST00000575506 885 ntBASIC22.45■■□□□ 1.18
PGBD3Q8N328 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.45■■□□□ 1.18
PGBD3Q8N328 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PGBD3Q8N328 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD3Q8N328 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.45■■□□□ 1.18
PGBD3Q8N328 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD3Q8N328 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.45■■□□□ 1.18
PGBD3Q8N328 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD3Q8N328 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGBD3Q8N328 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGBD3Q8N328 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PGBD3Q8N328 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
PGBD3Q8N328 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.44■■□□□ 1.18
PGBD3Q8N328 OR2I1P-207ENST00000453522 948 ntBASIC22.44■■□□□ 1.18
PGBD3Q8N328 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.44■■□□□ 1.18
PGBD3Q8N328 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.44■■□□□ 1.18
PGBD3Q8N328 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.44■■□□□ 1.18
PGBD3Q8N328 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.44■■□□□ 1.18
PGBD3Q8N328 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.44■■□□□ 1.18
PGBD3Q8N328 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGBD3Q8N328 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD3Q8N328 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.43■■□□□ 1.18
PGBD3Q8N328 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD3Q8N328 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD3Q8N328 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD3Q8N328 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.43■■□□□ 1.18
PGBD3Q8N328 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.43■■□□□ 1.18
PGBD3Q8N328 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.43■■□□□ 1.18
PGBD3Q8N328 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PGBD3Q8N328 DUX4L4-201ENST00000566884 1269 ntBASIC22.43■■□□□ 1.18
PGBD3Q8N328 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD3Q8N328 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD3Q8N328 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGBD3Q8N328 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PGBD3Q8N328 KRT18P14-201ENST00000534205 1250 ntBASIC22.42■■□□□ 1.18
PGBD3Q8N328 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PGBD3Q8N328 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
PGBD3Q8N328 NTF6G-201ENST00000591094 616 ntBASIC22.42■■□□□ 1.18
PGBD3Q8N328 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PGBD3Q8N328 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGBD3Q8N328 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PGBD3Q8N328 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGBD3Q8N328 LINC02228-203ENST00000641970 1355 ntBASIC22.41■■□□□ 1.18
PGBD3Q8N328 LINC01529-204ENST00000636474 1715 ntBASIC22.41■■□□□ 1.18
PGBD3Q8N328 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.41■■□□□ 1.18
PGBD3Q8N328 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PGBD3Q8N328 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.41■■□□□ 1.18
PGBD3Q8N328 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.41■■□□□ 1.18
PGBD3Q8N328 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PGBD3Q8N328 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PGBD3Q8N328 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGBD3Q8N328 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGBD3Q8N328 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PGBD3Q8N328 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PGBD3Q8N328 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.4■■□□□ 1.18
PGBD3Q8N328 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PGBD3Q8N328 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.4■■□□□ 1.18
PGBD3Q8N328 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PGBD3Q8N328 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.4■■□□□ 1.18
PGBD3Q8N328 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PGBD3Q8N328 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PGBD3Q8N328 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
PGBD3Q8N328 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.4■■□□□ 1.18
PGBD3Q8N328 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PGBD3Q8N328 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.4■■□□□ 1.18
PGBD3Q8N328 AC092437.1-201ENST00000624794 1048 ntBASIC22.4■■□□□ 1.18
PGBD3Q8N328 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PGBD3Q8N328 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PGBD3Q8N328 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms