Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 AC079630.1-202ENST00000618127 1840 ntBASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 AC016769.1-201ENST00000409132 1010 ntBASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL27A1Q8IZC6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.21■□□□□ 0.99
COL27A1Q8IZC6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL27A1Q8IZC6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.21■□□□□ 0.99
COL27A1Q8IZC6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.21■□□□□ 0.99
COL27A1Q8IZC6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.21■□□□□ 0.99
COL27A1Q8IZC6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.21■□□□□ 0.99
COL27A1Q8IZC6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.21■□□□□ 0.99
COL27A1Q8IZC6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL27A1Q8IZC6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 AP004607.4-201ENST00000530158 1459 ntBASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL27A1Q8IZC6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 CDCA4P2-201ENST00000441182 718 ntBASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COL27A1Q8IZC6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 AC137761.2-201ENST00000561729 223 ntBASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 AC145350.3-201ENST00000569033 163 ntBASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.18■□□□□ 0.98
COL27A1Q8IZC6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 LINC02228-203ENST00000641970 1355 ntBASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 AC004854.2-201ENST00000608450 1441 ntBASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL27A1Q8IZC6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.16■□□□□ 0.98
COL27A1Q8IZC6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL27A1Q8IZC6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL27A1Q8IZC6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL27A1Q8IZC6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.14■□□□□ 0.97
COL27A1Q8IZC6 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.14■□□□□ 0.97
COL27A1Q8IZC6 LINC01529-204ENST00000636474 1715 ntBASIC21.14■□□□□ 0.97
COL27A1Q8IZC6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
COL27A1Q8IZC6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL27A1Q8IZC6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL27A1Q8IZC6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms