Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 DUX4L4-201ENST00000566884 1269 ntBASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE9Q8IYJ1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE9Q8IYJ1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CPNE9Q8IYJ1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.86■■□□□ 1.09
CPNE9Q8IYJ1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE9Q8IYJ1 AL356441.2-201ENST00000443009 864 ntBASIC21.86■■□□□ 1.09
CPNE9Q8IYJ1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE9Q8IYJ1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE9Q8IYJ1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE9Q8IYJ1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 AL356740.2-201ENST00000601559 647 ntBASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CPNE9Q8IYJ1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 MIR3621-201ENST00000580529 85 ntBASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CPNE9Q8IYJ1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE9Q8IYJ1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE9Q8IYJ1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE9Q8IYJ1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CPNE9Q8IYJ1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.83■■□□□ 1.08
CPNE9Q8IYJ1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.83■■□□□ 1.08
CPNE9Q8IYJ1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPNE9Q8IYJ1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPNE9Q8IYJ1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CPNE9Q8IYJ1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CPNE9Q8IYJ1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CPNE9Q8IYJ1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE9Q8IYJ1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE9Q8IYJ1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.81■■□□□ 1.08
CPNE9Q8IYJ1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE9Q8IYJ1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CPNE9Q8IYJ1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.81■■□□□ 1.08
CPNE9Q8IYJ1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE9Q8IYJ1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 AC009086.3-201ENST00000623486 1008 ntBASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE9Q8IYJ1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms