Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF440Q8IYI8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF440Q8IYI8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF440Q8IYI8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ZNF440Q8IYI8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 AL117328.2-201ENST00000624617 1940 ntBASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ZNF440Q8IYI8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 AC127496.7-201ENST00000625110 1798 ntBASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF440Q8IYI8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 AL499627.2-201ENST00000606283 725 ntBASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF440Q8IYI8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 AL356441.2-201ENST00000443009 864 ntBASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF440Q8IYI8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 AC092171.4-201ENST00000609130 632 ntBASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF440Q8IYI8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF440Q8IYI8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 GUSBP5-202ENST00000510805 1989 ntBASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 SRD5A1P1-201ENST00000442297 786 ntBASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 AC079834.2-201ENST00000609776 1949 ntBASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF440Q8IYI8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms