Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
SMC5Q8IY18 AC080038.3-201ENST00000623346 1952 ntBASIC27.55■■■□□ 2
SMC5Q8IY18 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC27.55■■■□□ 2
SMC5Q8IY18 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC27.55■■■□□ 2
SMC5Q8IY18 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
SMC5Q8IY18 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.55■■■□□ 2
SMC5Q8IY18 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC27.54■■■□□ 2
SMC5Q8IY18 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.54■■■□□ 2
SMC5Q8IY18 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
SMC5Q8IY18 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SMC5Q8IY18 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
SMC5Q8IY18 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.54■■■□□ 2
SMC5Q8IY18 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SMC5Q8IY18 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC27.54■■■□□ 2
SMC5Q8IY18 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.54■■■□□ 2
SMC5Q8IY18 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.54■■■□□ 2
SMC5Q8IY18 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
SMC5Q8IY18 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.54■■■□□ 2
SMC5Q8IY18 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SMC5Q8IY18 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
SMC5Q8IY18 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SMC5Q8IY18 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SMC5Q8IY18 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.53■■■□□ 2
SMC5Q8IY18 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.53■■■□□ 2
SMC5Q8IY18 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.53■■■□□ 2
SMC5Q8IY18 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC27.53■■■□□ 2
SMC5Q8IY18 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SMC5Q8IY18 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
SMC5Q8IY18 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.52■■■□□ 2
SMC5Q8IY18 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.52■■■□□ 2
SMC5Q8IY18 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
SMC5Q8IY18 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.52■■■□□ 2
SMC5Q8IY18 AC009086.3-201ENST00000623486 1008 ntBASIC27.52■■■□□ 2
SMC5Q8IY18 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMC5Q8IY18 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.52■■■□□ 2
SMC5Q8IY18 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC27.52■■■□□ 2
SMC5Q8IY18 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.52■■■□□ 2
SMC5Q8IY18 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.51■■■□□ 2
SMC5Q8IY18 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
SMC5Q8IY18 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.51■■■□□ 2
SMC5Q8IY18 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.51■■□□□ 1.99
SMC5Q8IY18 MIR6724-1-201ENST00000616420 92 ntBASIC27.51■■□□□ 1.99
SMC5Q8IY18 MIR6724-2-201ENST00000616483 92 ntBASIC27.51■■□□□ 1.99
SMC5Q8IY18 MIR6724-4-201ENST00000617390 92 ntBASIC27.51■■□□□ 1.99
SMC5Q8IY18 MIR6724-3-201ENST00000622482 92 ntBASIC27.51■■□□□ 1.99
SMC5Q8IY18 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMC5Q8IY18 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.51■■□□□ 1.99
SMC5Q8IY18 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
SMC5Q8IY18 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMC5Q8IY18 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMC5Q8IY18 CLDN5-201ENST00000403084 2357 ntBASIC27.51■■□□□ 1.99
SMC5Q8IY18 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
SMC5Q8IY18 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.51■■□□□ 1.99
SMC5Q8IY18 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
SMC5Q8IY18 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.51■■□□□ 1.99
SMC5Q8IY18 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMC5Q8IY18 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.51■■□□□ 1.99
SMC5Q8IY18 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.51■■□□□ 1.99
SMC5Q8IY18 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SMC5Q8IY18 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SMC5Q8IY18 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SMC5Q8IY18 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.5■■□□□ 1.99
SMC5Q8IY18 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SMC5Q8IY18 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SMC5Q8IY18 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SMC5Q8IY18 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC27.49■■□□□ 1.99
SMC5Q8IY18 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SMC5Q8IY18 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
SMC5Q8IY18 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SMC5Q8IY18 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.49■■□□□ 1.99
SMC5Q8IY18 AL035685.1-201ENST00000636663 812 ntBASIC27.49■■□□□ 1.99
SMC5Q8IY18 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
SMC5Q8IY18 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.49■■□□□ 1.99
SMC5Q8IY18 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SMC5Q8IY18 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMC5Q8IY18 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.48■■□□□ 1.99
SMC5Q8IY18 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMC5Q8IY18 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
SMC5Q8IY18 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMC5Q8IY18 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMC5Q8IY18 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SMC5Q8IY18 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SMC5Q8IY18 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMC5Q8IY18 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMC5Q8IY18 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMC5Q8IY18 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMC5Q8IY18 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMC5Q8IY18 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMC5Q8IY18 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMC5Q8IY18 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMC5Q8IY18 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SMC5Q8IY18 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMC5Q8IY18 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.46■■□□□ 1.99
SMC5Q8IY18 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.46■■□□□ 1.99
SMC5Q8IY18 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
SMC5Q8IY18 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
SMC5Q8IY18 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMC5Q8IY18 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SMC5Q8IY18 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMC5Q8IY18 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms