Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.19■■□□□ 1.46
ZC3H3Q8IXZ2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 AL512631.2-201ENST00000604634 923 ntBASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZC3H3Q8IXZ2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 LINC00526-201ENST00000581067 1875 ntBASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 AC242852.2-201ENST00000615738 1807 ntBASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
ZC3H3Q8IXZ2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZC3H3Q8IXZ2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZC3H3Q8IXZ2 AL356740.2-201ENST00000601559 647 ntBASIC24.16■■□□□ 1.46
ZC3H3Q8IXZ2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ZC3H3Q8IXZ2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
ZC3H3Q8IXZ2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZC3H3Q8IXZ2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZC3H3Q8IXZ2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.16■■□□□ 1.46
ZC3H3Q8IXZ2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 EP400NL-214ENST00000641289 2402 ntBASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 AC139530.1-201ENST00000575312 1977 ntBASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 AC241377.3-202ENST00000626088 1088 ntBASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 AC241585.3-202ENST00000628937 1088 ntBASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 AC245100.8-202ENST00000629247 1058 ntBASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
ZC3H3Q8IXZ2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
ZC3H3Q8IXZ2 AC004687.1-201ENST00000579003 1625 ntBASIC24.14■■□□□ 1.46
ZC3H3Q8IXZ2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZC3H3Q8IXZ2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZC3H3Q8IXZ2 AL356441.2-201ENST00000443009 864 ntBASIC24.14■■□□□ 1.45
ZC3H3Q8IXZ2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
ZC3H3Q8IXZ2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.14■■□□□ 1.45
ZC3H3Q8IXZ2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.14■■□□□ 1.45
ZC3H3Q8IXZ2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3H3Q8IXZ2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZC3H3Q8IXZ2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZC3H3Q8IXZ2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.12■■□□□ 1.45
ZC3H3Q8IXZ2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZC3H3Q8IXZ2 AC006455.2-201ENST00000429931 906 ntBASIC24.12■■□□□ 1.45
ZC3H3Q8IXZ2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ZC3H3Q8IXZ2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.12■■□□□ 1.45
ZC3H3Q8IXZ2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZC3H3Q8IXZ2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZC3H3Q8IXZ2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 AC080038.3-201ENST00000623346 1952 ntBASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 LINC01960-201ENST00000563759 1884 ntBASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
ZC3H3Q8IXZ2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.1■■□□□ 1.45
ZC3H3Q8IXZ2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
ZC3H3Q8IXZ2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms