Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RFPL4BQ6ZWI9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
RFPL4BQ6ZWI9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.67■□□□□ 0.74
RFPL4BQ6ZWI9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFPL4BQ6ZWI9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFPL4BQ6ZWI9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFPL4BQ6ZWI9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.64■□□□□ 0.74
RFPL4BQ6ZWI9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFPL4BQ6ZWI9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.64■□□□□ 0.74
RFPL4BQ6ZWI9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.74
RFPL4BQ6ZWI9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFPL4BQ6ZWI9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.64■□□□□ 0.73
RFPL4BQ6ZWI9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.64■□□□□ 0.73
RFPL4BQ6ZWI9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFPL4BQ6ZWI9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFPL4BQ6ZWI9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.64■□□□□ 0.73
RFPL4BQ6ZWI9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.64■□□□□ 0.73
RFPL4BQ6ZWI9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
RFPL4BQ6ZWI9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 AC005703.6-201ENST00000623265 1329 ntBASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 AL356441.2-201ENST00000443009 864 ntBASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 AC073130.3-201ENST00000624389 2278 ntBASIC19.62■□□□□ 0.73
RFPL4BQ6ZWI9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.61■□□□□ 0.73
RFPL4BQ6ZWI9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RFPL4BQ6ZWI9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RFPL4BQ6ZWI9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.6■□□□□ 0.73
RFPL4BQ6ZWI9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.6■□□□□ 0.73
RFPL4BQ6ZWI9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.6■□□□□ 0.73
RFPL4BQ6ZWI9 MIR6724-1-201ENST00000616420 92 ntBASIC19.6■□□□□ 0.73
RFPL4BQ6ZWI9 MIR6724-2-201ENST00000616483 92 ntBASIC19.6■□□□□ 0.73
RFPL4BQ6ZWI9 MIR6724-4-201ENST00000617390 92 ntBASIC19.6■□□□□ 0.73
RFPL4BQ6ZWI9 MIR6724-3-201ENST00000622482 92 ntBASIC19.6■□□□□ 0.73
RFPL4BQ6ZWI9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms