Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 AL353803.4-201ENST00000565882 1934 ntBASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDHR3Q6ZTQ4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 AC139530.1-201ENST00000575312 1977 ntBASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDHR3Q6ZTQ4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 MTDHP2-201ENST00000601468 714 ntBASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 AC010997.5-201ENST00000609182 354 ntBASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDHR3Q6ZTQ4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.22■■□□□ 1.15
CDHR3Q6ZTQ4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDHR3Q6ZTQ4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDHR3Q6ZTQ4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDHR3Q6ZTQ4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.21■■□□□ 1.15
CDHR3Q6ZTQ4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.21■■□□□ 1.15
CDHR3Q6ZTQ4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDHR3Q6ZTQ4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CDHR3Q6ZTQ4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDHR3Q6ZTQ4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDHR3Q6ZTQ4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.2■■□□□ 1.15
CDHR3Q6ZTQ4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CDHR3Q6ZTQ4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 SNX5-217ENST00000606557 1087 ntBASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 AC080038.3-201ENST00000623346 1952 ntBASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.19■■□□□ 1.14
CDHR3Q6ZTQ4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms