Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM53Q6P2H8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM53Q6P2H8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM53Q6P2H8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 AC004448.1-201ENST00000458332 883 ntBASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 MIR4787-201ENST00000607364 84 ntBASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 AL035685.1-201ENST00000636663 812 ntBASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM53Q6P2H8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM53Q6P2H8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 AC007952.6-201ENST00000573168 2673 ntBASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 AC003957.1-201ENST00000625108 2673 ntBASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM53Q6P2H8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM53Q6P2H8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM53Q6P2H8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM53Q6P2H8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM53Q6P2H8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM53Q6P2H8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM53Q6P2H8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TMEM53Q6P2H8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.02■□□□□ 0.8
TMEM53Q6P2H8 SNX5-217ENST00000606557 1087 ntBASIC20.02■□□□□ 0.8
TMEM53Q6P2H8 AC092028.1-203ENST00000608262 953 ntBASIC20.02■□□□□ 0.8
TMEM53Q6P2H8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM53Q6P2H8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM53Q6P2H8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM53Q6P2H8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms