Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.7■□□□□ 0.26
MRPL54Q6P161 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MRPL54Q6P161 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL54Q6P161 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.69■□□□□ 0.26
MRPL54Q6P161 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MRPL54Q6P161 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL54Q6P161 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL54Q6P161 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL54Q6P161 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL54Q6P161 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.69■□□□□ 0.26
MRPL54Q6P161 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MRPL54Q6P161 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.69■□□□□ 0.26
MRPL54Q6P161 LINC01971-201ENST00000617888 1048 ntBASIC16.69■□□□□ 0.26
MRPL54Q6P161 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL54Q6P161 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL54Q6P161 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL54Q6P161 AC005229.4-201ENST00000610085 2198 ntBASIC16.69■□□□□ 0.26
MRPL54Q6P161 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
MRPL54Q6P161 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MRPL54Q6P161 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.68■□□□□ 0.26
MRPL54Q6P161 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 AC079630.1-202ENST00000618127 1840 ntBASIC16.68■□□□□ 0.26
MRPL54Q6P161 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MRPL54Q6P161 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MRPL54Q6P161 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 MIR3960-201ENST00000583311 91 ntBASIC16.68■□□□□ 0.26
MRPL54Q6P161 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MRPL54Q6P161 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL54Q6P161 AC080038.3-201ENST00000623346 1952 ntBASIC16.68■□□□□ 0.26
MRPL54Q6P161 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL54Q6P161 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL54Q6P161 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL54Q6P161 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL54Q6P161 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL54Q6P161 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL54Q6P161 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL54Q6P161 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 FAM99A-202ENST00000538190 1989 ntBASIC16.67■□□□□ 0.26
MRPL54Q6P161 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL54Q6P161 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL54Q6P161 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.67■□□□□ 0.26
MRPL54Q6P161 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.66■□□□□ 0.26
MRPL54Q6P161 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.66■□□□□ 0.26
MRPL54Q6P161 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.66■□□□□ 0.26
MRPL54Q6P161 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
MRPL54Q6P161 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL54Q6P161 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MRPL54Q6P161 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL54Q6P161 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms