Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS13DQ5THJ4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 AC026185.1-201ENST00000445748 174 ntBASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 AC105233.4-201ENST00000642045 216 ntBASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13DQ5THJ4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 KRT18P6-201ENST00000555540 1265 ntBASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 AC145676.1-201ENST00000514988 2004 ntBASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13DQ5THJ4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 AL138781.1-201ENST00000566567 1274 ntBASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 NCF1B-203ENST00000435988 1254 ntBASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 AP004607.4-201ENST00000530158 1459 ntBASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 AC016769.1-201ENST00000409132 1010 ntBASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 AC066615.1-201ENST00000640911 628 ntBASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13DQ5THJ4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13DQ5THJ4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13DQ5THJ4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13DQ5THJ4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13DQ5THJ4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13DQ5THJ4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13DQ5THJ4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13DQ5THJ4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13DQ5THJ4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13DQ5THJ4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.08■□□□□ 0
VPS13DQ5THJ4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
VPS13DQ5THJ4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.08■□□□□ 0
VPS13DQ5THJ4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.08■□□□□ 0
VPS13DQ5THJ4 AC137761.2-201ENST00000561729 223 ntBASIC15.08■□□□□ 0
VPS13DQ5THJ4 AC145350.3-201ENST00000569033 163 ntBASIC15.08■□□□□ 0
VPS13DQ5THJ4 AC008687.6-201ENST00000596318 630 ntBASIC15.08■□□□□ 0
VPS13DQ5THJ4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC15.08■□□□□ 0
VPS13DQ5THJ4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
VPS13DQ5THJ4 MIR663A-201ENST00000385250 93 ntBASIC15.08■□□□□ 0
VPS13DQ5THJ4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13DQ5THJ4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
VPS13DQ5THJ4 BID-214ENST00000617586 542 ntTSL 5 BASIC15.08■□□□□ 0
VPS13DQ5THJ4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms