Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HIST1H1AQ02539 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HIST1H1AQ02539 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 AC137767.1-201ENST00000602918 1920 ntBASIC16.83■□□□□ 0.28
HIST1H1AQ02539 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H1AQ02539 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H1AQ02539 AC127496.7-201ENST00000625110 1798 ntBASIC16.82■□□□□ 0.28
HIST1H1AQ02539 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H1AQ02539 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 GUSBP5-202ENST00000510805 1989 ntBASIC16.8■□□□□ 0.28
HIST1H1AQ02539 LINC00526-201ENST00000581067 1875 ntBASIC16.8■□□□□ 0.28
HIST1H1AQ02539 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 SNX5-217ENST00000606557 1087 ntBASIC16.8■□□□□ 0.28
HIST1H1AQ02539 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H1AQ02539 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms