Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 TUB2YFL037W 1374 nt5.11□□□□□ -1.59
SSL2Q00578 OLE1YGL055W 1533 nt5.11□□□□□ -1.59
SSL2Q00578 KTR7YIL085C 1554 nt5.11□□□□□ -1.59
SSL2Q00578 THI22YPR121W 1719 nt5.11□□□□□ -1.59
SSL2Q00578 HOYDL227C 1761 nt5.1□□□□□ -1.59
SSL2Q00578 DOS2YDR068W 933 nt5.1□□□□□ -1.59
SSL2Q00578 NAT2YGR147C 867 nt5.1□□□□□ -1.59
SSL2Q00578 YIL021C-AYIL021C-A 270 nt5.1□□□□□ -1.59
SSL2Q00578 DAL3YIR032C 588 nt5.1□□□□□ -1.59
SSL2Q00578 SWC3YAL011W 1878 nt5.1□□□□□ -1.59
SSL2Q00578 RPL43BYJR094W-A 279 nt5.1□□□□□ -1.59
SSL2Q00578 CAB3YKL088W 1716 nt5.1□□□□□ -1.59
SSL2Q00578 SMD3YLR147C 306 nt5.1□□□□□ -1.59
SSL2Q00578 YLR346CYLR346C 306 nt5.1□□□□□ -1.59
SSL2Q00578 YPR071WYPR071W 636 nt5.1□□□□□ -1.59
SSL2Q00578 LOA1YPR139C 903 nt5.1□□□□□ -1.59
SSL2Q00578 AIM10YER087W 1731 nt5.09□□□□□ -1.59
SSL2Q00578 GAS2YLR343W 1668 nt5.09□□□□□ -1.59
SSL2Q00578 MEK1YOR351C 1494 nt5.09□□□□□ -1.59
SSL2Q00578 PHO12YHR215W 1404 nt5.09□□□□□ -1.59
SSL2Q00578 PHO11YAR071W 1404 nt5.09□□□□□ -1.59
SSL2Q00578 SRO9YCL037C 1305 nt5.09□□□□□ -1.59
SSL2Q00578 GPM2YDL021W 936 nt5.09□□□□□ -1.59
SSL2Q00578 YDR042CYDR042C 603 nt5.09□□□□□ -1.59
SSL2Q00578 ARG82YDR173C 1068 nt5.09□□□□□ -1.59
SSL2Q00578 YDR290WYDR290W 330 nt5.09□□□□□ -1.59
SSL2Q00578 SNA2YDR525W-A 240 nt5.09□□□□□ -1.59
SSL2Q00578 STE2YFL026W 1296 nt5.09□□□□□ -1.59
SSL2Q00578 YGL177WYGL177W 348 nt5.09□□□□□ -1.59
SSL2Q00578 YGR219WYGR219W 342 nt5.09□□□□□ -1.59
SSL2Q00578 GTT1YIR038C 705 nt5.09□□□□□ -1.59
SSL2Q00578 YJL156W-AYJL156W-A 222 nt5.09□□□□□ -1.59
SSL2Q00578 ERG3YLR056W 1098 nt5.09□□□□□ -1.59
SSL2Q00578 YLR156WYLR156W 345 nt5.09□□□□□ -1.59
SSL2Q00578 YLR157W-DYLR157W-D 213 nt5.09□□□□□ -1.59
SSL2Q00578 PRM9YAR031W 897 nt5.09□□□□□ -1.59
SSL2Q00578 YLR159WYLR159W 345 nt5.09□□□□□ -1.59
SSL2Q00578 YLR161WYLR161W 345 nt5.09□□□□□ -1.59
SSL2Q00578 COS3YML132W 1140 nt5.09□□□□□ -1.59
SSL2Q00578 END3YNL084C 1050 nt5.09□□□□□ -1.59
SSL2Q00578 POC4YPL144W 447 nt5.09□□□□□ -1.59
SSL2Q00578 COS2YBR302C 1140 nt5.09□□□□□ -1.59
SSL2Q00578 GRX1YCL035C 333 nt5.09□□□□□ -1.59
SSL2Q00578 MET4YNL103W 2019 nt5.09□□□□□ -1.6
SSL2Q00578 YGL036WYGL036W 2730 nt5.09□□□□□ -1.6
SSL2Q00578 IMA3YIL172C 1770 nt5.09□□□□□ -1.6
SSL2Q00578 IMA4YJL221C 1770 nt5.09□□□□□ -1.6
SSL2Q00578 EAR1YMR171C 1653 nt5.08□□□□□ -1.6
SSL2Q00578 NMD3YHR170W 1557 nt5.08□□□□□ -1.6
SSL2Q00578 HUL4YJR036C 2679 nt5.08□□□□□ -1.6
SSL2Q00578 FZO1YBR179C 2568 nt5.08□□□□□ -1.6
SSL2Q00578 CPR1YDR155C 489 nt5.08□□□□□ -1.6
SSL2Q00578 RPC17YJL011C 486 nt5.08□□□□□ -1.6
SSL2Q00578 YLR407WYLR407W 687 nt5.08□□□□□ -1.6
SSL2Q00578 CDC73YLR418C 1182 nt5.08□□□□□ -1.6
SSL2Q00578 TAP42YMR028W 1101 nt5.08□□□□□ -1.6
SSL2Q00578 YOL118CYOL118C 309 nt5.08□□□□□ -1.6
SSL2Q00578 PCA1YBR295W 3651 nt5.08□□□□□ -1.6
SSL2Q00578 MKS1YNL076W 1755 nt5.08□□□□□ -1.6
SSL2Q00578 PUS9YDL036C 1389 nt5.07□□□□□ -1.6
SSL2Q00578 CEG1YGL130W 1380 nt5.07□□□□□ -1.6
SSL2Q00578 VHS2YIL135C 1311 nt5.07□□□□□ -1.6
SSL2Q00578 RNY1YPL123C 1305 nt5.07□□□□□ -1.6
SSL2Q00578 YDL012CYDL012C 324 nt5.07□□□□□ -1.6
SSL2Q00578 YIL152WYIL152W 708 nt5.07□□□□□ -1.6
SSL2Q00578 IRC25YLR021W 540 nt5.07□□□□□ -1.6
SSL2Q00578 ATP20YPR020W 348 nt5.07□□□□□ -1.6
SSL2Q00578 NAT3YPR131C 588 nt5.07□□□□□ -1.6
SSL2Q00578 YDR444WYDR444W 2064 nt5.07□□□□□ -1.6
SSL2Q00578 EKI1YDR147W 1605 nt5.07□□□□□ -1.6
SSL2Q00578 IMD2YHR216W 1572 nt5.07□□□□□ -1.6
SSL2Q00578 PAN1YIR006C 4443 nt5.07□□□□□ -1.6
SSL2Q00578 FUM1YPL262W 1467 nt5.07□□□□□ -1.6
SSL2Q00578 PRM7YDL039C 2097 nt5.06□□□□□ -1.6
SSL2Q00578 PLP1YDR183W 693 nt5.06□□□□□ -1.6
SSL2Q00578 YDR220CYDR220C 294 nt5.06□□□□□ -1.6
SSL2Q00578 DCV1YFR012W 609 nt5.06□□□□□ -1.6
SSL2Q00578 RPC25YKL144C 639 nt5.06□□□□□ -1.6
SSL2Q00578 GAB1YLR459W 1185 nt5.06□□□□□ -1.6
SSL2Q00578 YBL077WYBL077W 432 nt5.06□□□□□ -1.6
SSL2Q00578 MRPL37YBR268W 318 nt5.06□□□□□ -1.6
SSL2Q00578 UPC2YDR213W 2742 nt5.06□□□□□ -1.6
SSL2Q00578 NUP2YLR335W 2163 nt5.05□□□□□ -1.6
SSL2Q00578 MDL1YLR188W 2088 nt5.05□□□□□ -1.6
SSL2Q00578 YCR024C-BYCR024C-B 267 nt5.05□□□□□ -1.6
SSL2Q00578 RIP1YEL024W 648 nt5.05□□□□□ -1.6
SSL2Q00578 ARO2YGL148W 1131 nt5.05□□□□□ -1.6
SSL2Q00578 PEF1YGR058W 1008 nt5.05□□□□□ -1.6
SSL2Q00578 TTI2YJR136C 1266 nt5.05□□□□□ -1.6
SSL2Q00578 YKR047WYKR047W 306 nt5.05□□□□□ -1.6
SSL2Q00578 YLR363W-AYLR363W-A 258 nt5.05□□□□□ -1.6
SSL2Q00578 YNG1YOR064C 660 nt5.05□□□□□ -1.6
SSL2Q00578 RPB8YOR224C 441 nt5.05□□□□□ -1.6
SSL2Q00578 MPD1YOR288C 957 nt5.05□□□□□ -1.6
SSL2Q00578 UMP1YBR173C 447 nt5.05□□□□□ -1.6
SSL2Q00578 SEG2YKL105C 3399 nt5.04□□□□□ -1.6
SSL2Q00578 PEX30YLR324W 1572 nt5.04□□□□□ -1.6
SSL2Q00578 BDP1YNL039W 1785 nt5.04□□□□□ -1.6
SSL2Q00578 HST1YOL068C 1512 nt5.04□□□□□ -1.6
SSL2Q00578 ARF2YDL137W 546 nt5.04□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms