Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPAP78324 EP400NL-214ENST00000641289 2402 ntBASIC20.12■□□□□ 0.81
SIRPAP78324 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPAP78324 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPAP78324 C1orf229-201ENST00000623686 2258 ntBASIC20.12■□□□□ 0.81
SIRPAP78324 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SIRPAP78324 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPAP78324 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SIRPAP78324 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.12■□□□□ 0.81
SIRPAP78324 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPAP78324 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPAP78324 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPAP78324 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPAP78324 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SIRPAP78324 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIRPAP78324 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.11■□□□□ 0.81
SIRPAP78324 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.11■□□□□ 0.81
SIRPAP78324 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIRPAP78324 AC099791.2-201ENST00000605725 427 ntBASIC20.11■□□□□ 0.81
SIRPAP78324 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SIRPAP78324 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.11■□□□□ 0.81
SIRPAP78324 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SIRPAP78324 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.11■□□□□ 0.81
SIRPAP78324 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SIRPAP78324 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIRPAP78324 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.11■□□□□ 0.81
SIRPAP78324 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIRPAP78324 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SIRPAP78324 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIRPAP78324 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.1■□□□□ 0.81
SIRPAP78324 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPAP78324 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPAP78324 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPAP78324 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPAP78324 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPAP78324 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.1■□□□□ 0.81
SIRPAP78324 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPAP78324 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
SIRPAP78324 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPAP78324 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPAP78324 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPAP78324 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPAP78324 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SIRPAP78324 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SIRPAP78324 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPAP78324 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SIRPAP78324 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPAP78324 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.09■□□□□ 0.81
SIRPAP78324 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SIRPAP78324 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.08■□□□□ 0.81
SIRPAP78324 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIRPAP78324 AC135279.3-201ENST00000610945 1311 ntBASIC20.08■□□□□ 0.81
SIRPAP78324 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SIRPAP78324 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.08■□□□□ 0.81
SIRPAP78324 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIRPAP78324 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIRPAP78324 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.08■□□□□ 0.81
SIRPAP78324 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.08■□□□□ 0.81
SIRPAP78324 AC024257.2-201ENST00000549699 147 ntBASIC20.08■□□□□ 0.81
SIRPAP78324 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.08■□□□□ 0.81
SIRPAP78324 AC005837.3-201ENST00000612163 286 ntBASIC20.08■□□□□ 0.81
SIRPAP78324 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.08■□□□□ 0.81
SIRPAP78324 AC106739.1-201ENST00000617035 715 ntBASIC20.08■□□□□ 0.81
SIRPAP78324 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SIRPAP78324 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SIRPAP78324 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.08■□□□□ 0.8
SIRPAP78324 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.08■□□□□ 0.8
SIRPAP78324 SYT6-210ENST00000641643 1587 ntBASIC20.08■□□□□ 0.8
SIRPAP78324 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.08■□□□□ 0.8
SIRPAP78324 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SIRPAP78324 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIRPAP78324 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIRPAP78324 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SIRPAP78324 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.07■□□□□ 0.8
SIRPAP78324 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.07■□□□□ 0.8
SIRPAP78324 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.07■□□□□ 0.8
SIRPAP78324 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.07■□□□□ 0.8
SIRPAP78324 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIRPAP78324 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIRPAP78324 C17orf82-201ENST00000623772 1530 ntBASIC20.07■□□□□ 0.8
SIRPAP78324 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SIRPAP78324 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIRPAP78324 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIRPAP78324 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.06■□□□□ 0.8
SIRPAP78324 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SIRPAP78324 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIRPAP78324 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.06■□□□□ 0.8
SIRPAP78324 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.06■□□□□ 0.8
SIRPAP78324 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SIRPAP78324 AC092171.4-201ENST00000609130 632 ntBASIC20.06■□□□□ 0.8
SIRPAP78324 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.06■□□□□ 0.8
SIRPAP78324 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIRPAP78324 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIRPAP78324 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPAP78324 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPAP78324 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPAP78324 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPAP78324 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.05■□□□□ 0.8
SIRPAP78324 DUX4L19-201ENST00000557448 1267 ntBASIC20.05■□□□□ 0.8
SIRPAP78324 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms