Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 DUSP8P3-201ENST00000399571 1760 ntBASIC19.22■□□□□ 0.67
SEC61A1P61619 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEC61A1P61619 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SEC61A1P61619 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.22■□□□□ 0.67
SEC61A1P61619 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.22■□□□□ 0.67
SEC61A1P61619 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.22■□□□□ 0.67
SEC61A1P61619 MIR6724-1-201ENST00000616420 92 ntBASIC19.22■□□□□ 0.67
SEC61A1P61619 MIR6724-2-201ENST00000616483 92 ntBASIC19.22■□□□□ 0.67
SEC61A1P61619 MIR6724-4-201ENST00000617390 92 ntBASIC19.22■□□□□ 0.67
SEC61A1P61619 MIR6724-3-201ENST00000622482 92 ntBASIC19.22■□□□□ 0.67
SEC61A1P61619 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.22■□□□□ 0.67
SEC61A1P61619 AL137060.1-201ENST00000618151 2648 ntBASIC19.22■□□□□ 0.67
SEC61A1P61619 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC61A1P61619 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEC61A1P61619 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC61A1P61619 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC61A1P61619 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEC61A1P61619 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SEC61A1P61619 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC61A1P61619 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC61A1P61619 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC61A1P61619 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SEC61A1P61619 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEC61A1P61619 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC61A1P61619 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.21■□□□□ 0.67
SEC61A1P61619 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC61A1P61619 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC61A1P61619 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SEC61A1P61619 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.21■□□□□ 0.67
SEC61A1P61619 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC61A1P61619 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SEC61A1P61619 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC61A1P61619 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC61A1P61619 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC61A1P61619 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.2■□□□□ 0.66
SEC61A1P61619 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC61A1P61619 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC61A1P61619 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.2■□□□□ 0.66
SEC61A1P61619 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC61A1P61619 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.2■□□□□ 0.66
SEC61A1P61619 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.2■□□□□ 0.66
SEC61A1P61619 AL117332.1-201ENST00000622628 974 ntBASIC19.2■□□□□ 0.66
SEC61A1P61619 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEC61A1P61619 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
SEC61A1P61619 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC61A1P61619 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.19■□□□□ 0.66
SEC61A1P61619 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SEC61A1P61619 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC61A1P61619 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC61A1P61619 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC61A1P61619 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.19■□□□□ 0.66
SEC61A1P61619 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.19■□□□□ 0.66
SEC61A1P61619 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.19■□□□□ 0.66
SEC61A1P61619 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.19■□□□□ 0.66
SEC61A1P61619 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC61A1P61619 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC61A1P61619 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC61A1P61619 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEC61A1P61619 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC61A1P61619 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEC61A1P61619 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SEC61A1P61619 AC008406.3-201ENST00000620001 1374 ntBASIC19.19■□□□□ 0.66
SEC61A1P61619 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC61A1P61619 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC61A1P61619 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC61A1P61619 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC61A1P61619 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.18■□□□□ 0.66
SEC61A1P61619 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.18■□□□□ 0.66
SEC61A1P61619 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.18■□□□□ 0.66
SEC61A1P61619 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.18■□□□□ 0.66
SEC61A1P61619 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.18■□□□□ 0.66
SEC61A1P61619 AC131274.2-201ENST00000580697 1507 ntBASIC19.18■□□□□ 0.66
SEC61A1P61619 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC61A1P61619 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC61A1P61619 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC61A1P61619 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC61A1P61619 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.17■□□□□ 0.66
SEC61A1P61619 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SEC61A1P61619 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.17■□□□□ 0.66
SEC61A1P61619 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.17■□□□□ 0.66
SEC61A1P61619 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.17■□□□□ 0.66
SEC61A1P61619 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SEC61A1P61619 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.17■□□□□ 0.66
SEC61A1P61619 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.17■□□□□ 0.66
SEC61A1P61619 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.17■□□□□ 0.66
SEC61A1P61619 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEC61A1P61619 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SEC61A1P61619 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC61A1P61619 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms