Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 KRT16P3-201ENST00000439127 1283 ntBASIC21.92■■□□□ 1.1
CDKN2DP55273 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2DP55273 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.92■■□□□ 1.1
CDKN2DP55273 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.92■■□□□ 1.1
CDKN2DP55273 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2DP55273 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2DP55273 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2DP55273 ECEL1P1-201ENST00000373592 1742 ntBASIC21.92■■□□□ 1.1
CDKN2DP55273 AC087742.1-201ENST00000575880 1738 ntBASIC21.92■■□□□ 1.1
CDKN2DP55273 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKN2DP55273 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKN2DP55273 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKN2DP55273 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKN2DP55273 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKN2DP55273 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CDKN2DP55273 AC127496.7-201ENST00000625110 1798 ntBASIC21.91■■□□□ 1.1
CDKN2DP55273 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKN2DP55273 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKN2DP55273 LINC00526-201ENST00000581067 1875 ntBASIC21.9■■□□□ 1.1
CDKN2DP55273 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.9■■□□□ 1.1
CDKN2DP55273 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN2DP55273 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN2DP55273 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN2DP55273 GUSBP5-201ENST00000418136 578 ntBASIC21.9■■□□□ 1.1
CDKN2DP55273 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKN2DP55273 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.9■■□□□ 1.1
CDKN2DP55273 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKN2DP55273 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN2DP55273 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN2DP55273 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDKN2DP55273 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDKN2DP55273 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
CDKN2DP55273 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
CDKN2DP55273 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.89■■□□□ 1.09
CDKN2DP55273 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDKN2DP55273 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.89■■□□□ 1.09
CDKN2DP55273 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.89■■□□□ 1.09
CDKN2DP55273 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKN2DP55273 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.89■■□□□ 1.09
CDKN2DP55273 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKN2DP55273 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKN2DP55273 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CDKN2DP55273 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2DP55273 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2DP55273 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2DP55273 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2DP55273 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2DP55273 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.88■■□□□ 1.09
CDKN2DP55273 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.88■■□□□ 1.09
CDKN2DP55273 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2DP55273 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2DP55273 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2DP55273 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2DP55273 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CDKN2DP55273 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN2DP55273 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN2DP55273 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN2DP55273 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.87■■□□□ 1.09
CDKN2DP55273 AC009086.3-201ENST00000623486 1008 ntBASIC21.87■■□□□ 1.09
CDKN2DP55273 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKN2DP55273 AC242852.2-201ENST00000615738 1807 ntBASIC21.87■■□□□ 1.09
CDKN2DP55273 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN2DP55273 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKN2DP55273 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN2DP55273 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.86■■□□□ 1.09
CDKN2DP55273 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKN2DP55273 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CDKN2DP55273 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKN2DP55273 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.86■■□□□ 1.09
CDKN2DP55273 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDKN2DP55273 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKN2DP55273 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.85■■□□□ 1.09
CDKN2DP55273 AC080038.3-201ENST00000623346 1952 ntBASIC21.85■■□□□ 1.09
CDKN2DP55273 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.85■■□□□ 1.09
CDKN2DP55273 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.85■■□□□ 1.09
CDKN2DP55273 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.85■■□□□ 1.09
CDKN2DP55273 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.85■■□□□ 1.09
CDKN2DP55273 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDKN2DP55273 AL117332.1-201ENST00000622628 974 ntBASIC21.85■■□□□ 1.09
CDKN2DP55273 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKN2DP55273 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKN2DP55273 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKN2DP55273 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKN2DP55273 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKN2DP55273 AC004687.1-201ENST00000579003 1625 ntBASIC21.84■■□□□ 1.09
CDKN2DP55273 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.84■■□□□ 1.09
CDKN2DP55273 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CDKN2DP55273 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CDKN2DP55273 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CDKN2DP55273 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKN2DP55273 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN2DP55273 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CDKN2DP55273 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN2DP55273 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN2DP55273 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN2DP55273 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN2DP55273 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN2DP55273 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN2DP55273 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.83■■□□□ 1.09
CDKN2DP55273 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms