Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDX1P52945 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.5■■□□□ 1.03
PDX1P52945 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PDX1P52945 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PDX1P52945 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PDX1P52945 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PDX1P52945 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.5■■□□□ 1.03
PDX1P52945 AC012414.1-201ENST00000556676 535 ntBASIC21.5■■□□□ 1.03
PDX1P52945 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDX1P52945 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDX1P52945 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.5■■□□□ 1.03
PDX1P52945 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDX1P52945 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.5■■□□□ 1.03
PDX1P52945 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDX1P52945 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDX1P52945 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDX1P52945 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDX1P52945 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.49■■□□□ 1.03
PDX1P52945 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDX1P52945 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDX1P52945 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDX1P52945 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
PDX1P52945 AC123595.1-201ENST00000440769 1046 ntBASIC21.49■■□□□ 1.03
PDX1P52945 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.49■■□□□ 1.03
PDX1P52945 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.49■■□□□ 1.03
PDX1P52945 AL499627.2-201ENST00000606283 725 ntBASIC21.49■■□□□ 1.03
PDX1P52945 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.49■■□□□ 1.03
PDX1P52945 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.49■■□□□ 1.03
PDX1P52945 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDX1P52945 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.49■■□□□ 1.03
PDX1P52945 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDX1P52945 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDX1P52945 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDX1P52945 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.48■■□□□ 1.03
PDX1P52945 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDX1P52945 AC010525.1-201ENST00000585559 441 ntBASIC21.48■■□□□ 1.03
PDX1P52945 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.48■■□□□ 1.03
PDX1P52945 AL137784.2-201ENST00000607332 1000 ntBASIC21.48■■□□□ 1.03
PDX1P52945 ABCB10P4-201ENST00000566803 2184 ntBASIC21.48■■□□□ 1.03
PDX1P52945 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.48■■□□□ 1.03
PDX1P52945 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDX1P52945 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDX1P52945 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDX1P52945 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PDX1P52945 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDX1P52945 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PDX1P52945 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.47■■□□□ 1.03
PDX1P52945 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.47■■□□□ 1.03
PDX1P52945 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PDX1P52945 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.47■■□□□ 1.03
PDX1P52945 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDX1P52945 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.47■■□□□ 1.03
PDX1P52945 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDX1P52945 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDX1P52945 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.46■■□□□ 1.03
PDX1P52945 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDX1P52945 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDX1P52945 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDX1P52945 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.46■■□□□ 1.03
PDX1P52945 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.46■■□□□ 1.03
PDX1P52945 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.46■■□□□ 1.03
PDX1P52945 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDX1P52945 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
PDX1P52945 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDX1P52945 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDX1P52945 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDX1P52945 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDX1P52945 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.45■■□□□ 1.02
PDX1P52945 OR2I1P-207ENST00000453522 948 ntBASIC21.45■■□□□ 1.02
PDX1P52945 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.45■■□□□ 1.02
PDX1P52945 CCDC92B-201ENST00000575506 885 ntBASIC21.45■■□□□ 1.02
PDX1P52945 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.45■■□□□ 1.02
PDX1P52945 AL354811.1-201ENST00000610286 706 ntBASIC21.45■■□□□ 1.02
PDX1P52945 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.45■■□□□ 1.02
PDX1P52945 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PDX1P52945 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDX1P52945 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDX1P52945 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDX1P52945 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PDX1P52945 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.45■■□□□ 1.02
PDX1P52945 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.44■■□□□ 1.02
PDX1P52945 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PDX1P52945 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDX1P52945 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDX1P52945 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.44■■□□□ 1.02
PDX1P52945 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDX1P52945 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDX1P52945 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDX1P52945 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.44■■□□□ 1.02
PDX1P52945 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.44■■□□□ 1.02
PDX1P52945 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDX1P52945 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.44■■□□□ 1.02
PDX1P52945 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PDX1P52945 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PDX1P52945 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDX1P52945 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDX1P52945 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PDX1P52945 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PDX1P52945 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDX1P52945 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms