Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AC242852.2-201ENST00000615738 1807 ntBASIC21.36■■□□□ 1.01
CLCN2P51788 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CLCN2P51788 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCN2P51788 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CLCN2P51788 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCN2P51788 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN2P51788 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN2P51788 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN2P51788 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN2P51788 ANOS2P-203ENST00000472227 1816 ntBASIC21.35■■□□□ 1.01
CLCN2P51788 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCN2P51788 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCN2P51788 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN2P51788 AL356740.2-201ENST00000601559 647 ntBASIC21.35■■□□□ 1.01
CLCN2P51788 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.35■■□□□ 1.01
CLCN2P51788 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CLCN2P51788 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCN2P51788 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN2P51788 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN2P51788 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CLCN2P51788 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CLCN2P51788 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN2P51788 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN2P51788 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN2P51788 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN2P51788 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN2P51788 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN2P51788 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCN2P51788 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCN2P51788 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.34■■□□□ 1.01
CLCN2P51788 AL117332.1-201ENST00000622628 974 ntBASIC21.34■■□□□ 1.01
CLCN2P51788 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCN2P51788 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCN2P51788 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CLCN2P51788 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN2P51788 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN2P51788 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN2P51788 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN2P51788 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN2P51788 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN2P51788 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN2P51788 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLCN2P51788 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CLCN2P51788 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLCN2P51788 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.32■■□□□ 1
CLCN2P51788 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN2P51788 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN2P51788 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.32■■□□□ 1
CLCN2P51788 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.32■■□□□ 1
CLCN2P51788 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.32■■□□□ 1
CLCN2P51788 MIR3621-201ENST00000580529 85 ntBASIC21.32■■□□□ 1
CLCN2P51788 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.32■■□□□ 1
CLCN2P51788 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCN2P51788 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CLCN2P51788 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN2P51788 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLCN2P51788 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN2P51788 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.31■■□□□ 1
CLCN2P51788 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN2P51788 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN2P51788 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.31■■□□□ 1
CLCN2P51788 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.31■■□□□ 1
CLCN2P51788 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.31■■□□□ 1
CLCN2P51788 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CLCN2P51788 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.31■■□□□ 1
CLCN2P51788 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN2P51788 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCN2P51788 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN2P51788 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.31■■□□□ 1
CLCN2P51788 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCN2P51788 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLCN2P51788 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLCN2P51788 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLCN2P51788 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLCN2P51788 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.3■■□□□ 1
CLCN2P51788 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.3■■□□□ 1
CLCN2P51788 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.3■■□□□ 1
CLCN2P51788 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.3■■□□□ 1
CLCN2P51788 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.3■■□□□ 1
CLCN2P51788 AC008406.3-201ENST00000620001 1374 ntBASIC21.3■■□□□ 1
CLCN2P51788 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLCN2P51788 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.3■■□□□ 1
CLCN2P51788 AC005703.6-201ENST00000623265 1329 ntBASIC21.29■■□□□ 1
CLCN2P51788 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCN2P51788 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCN2P51788 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CLCN2P51788 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.29■■□□□ 1
CLCN2P51788 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCN2P51788 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCN2P51788 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCN2P51788 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCN2P51788 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.28■■□□□ 1
CLCN2P51788 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCN2P51788 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCN2P51788 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCN2P51788 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.28■■□□□ 1
CLCN2P51788 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.28■■□□□ 1
CLCN2P51788 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCN2P51788 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.28■■□□□ 1
CLCN2P51788 AL137060.1-201ENST00000618151 2648 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms