Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YBR134WYBR134W 402 nt4.07□□□□□ -1.76
SSN8P47821 UBS1YBR165W 834 nt4.07□□□□□ -1.76
SSN8P47821 PUT2YHR037W 1728 nt4.07□□□□□ -1.76
SSN8P47821 PUT1YLR142W 1431 nt4.06□□□□□ -1.76
SSN8P47821 RAD52YML032C 1416 nt4.06□□□□□ -1.76
SSN8P47821 FBP26YJL155C 1359 nt4.06□□□□□ -1.76
SSN8P47821 KRE5YOR336W 4098 nt4.06□□□□□ -1.76
SSN8P47821 SUL2YLR092W 2682 nt4.06□□□□□ -1.76
SSN8P47821 RPC53YDL150W 1269 nt4.06□□□□□ -1.76
SSN8P47821 YFT2YDR319C 825 nt4.06□□□□□ -1.76
SSN8P47821 YDR336WYDR336W 945 nt4.06□□□□□ -1.76
SSN8P47821 YER067C-AYER067C-A 324 nt4.06□□□□□ -1.76
SSN8P47821 RTA1YGR213C 954 nt4.06□□□□□ -1.76
SSN8P47821 VMA22YHR060W 546 nt4.06□□□□□ -1.76
SSN8P47821 YIL021C-AYIL021C-A 270 nt4.06□□□□□ -1.76
SSN8P47821 IRC9YJL142C 393 nt4.06□□□□□ -1.76
SSN8P47821 EBP2YKL172W 1284 nt4.06□□□□□ -1.76
SSN8P47821 UPS2YLR168C 693 nt4.06□□□□□ -1.76
SSN8P47821 PSY3YLR376C 729 nt4.06□□□□□ -1.76
SSN8P47821 RAD10YML095C 633 nt4.06□□□□□ -1.76
SSN8P47821 YPT53YNL093W 663 nt4.06□□□□□ -1.76
SSN8P47821 YNR061CYNR061C 660 nt4.06□□□□□ -1.76
SSN8P47821 MED7YOL135C 669 nt4.06□□□□□ -1.76
SSN8P47821 GLO4YOR040W 858 nt4.06□□□□□ -1.76
SSN8P47821 VPS21YOR089C 633 nt4.06□□□□□ -1.76
SSN8P47821 YBR219CYBR219C 384 nt4.06□□□□□ -1.76
SSN8P47821 KEX1YGL203C 2190 nt4.06□□□□□ -1.76
SSN8P47821 RIM4YHL024W 2142 nt4.06□□□□□ -1.76
SSN8P47821 FAA1YOR317W 2103 nt4.06□□□□□ -1.76
SSN8P47821 DBP3YGL078C 1572 nt4.06□□□□□ -1.76
SSN8P47821 SUP35YDR172W 2058 nt4.06□□□□□ -1.76
SSN8P47821 FMP30YPL103C 1407 nt4.05□□□□□ -1.76
SSN8P47821 TAF5YBR198C 2397 nt4.05□□□□□ -1.76
SSN8P47821 HOYDL227C 1761 nt4.05□□□□□ -1.76
SSN8P47821 OPT2YPR194C 2634 nt4.05□□□□□ -1.76
SSN8P47821 YAP1802YGR241C 1707 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)CtK(CUU)C 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)D1tK(CUU)D1 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)D2tK(CUU)D2 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)E1tK(CUU)E1 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)E2tK(CUU)E2 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)FtK(CUU)F 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)G1tK(CUU)G1 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)G2tK(CUU)G2 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)G3tK(CUU)G3 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)ItK(CUU)I 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)JtK(CUU)J 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)KtK(CUU)K 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)MtK(CUU)M 73 nt4.05□□□□□ -1.76
SSN8P47821 tK(CUU)PtK(CUU)P 73 nt4.05□□□□□ -1.76
SSN8P47821 RFC2YJR068W 1062 nt4.05□□□□□ -1.76
SSN8P47821 RPL43BYJR094W-A 279 nt4.05□□□□□ -1.76
SSN8P47821 TVP38YKR088C 1014 nt4.05□□□□□ -1.76
SSN8P47821 SRP40YKR092C 1221 nt4.05□□□□□ -1.76
SSN8P47821 BAG7YOR134W 1230 nt4.05□□□□□ -1.76
SSN8P47821 SSO1YPL232W 873 nt4.05□□□□□ -1.76
SSN8P47821 VMA1YDL185W 3216 nt4.05□□□□□ -1.76
SSN8P47821 EGT2YNL327W 3126 nt4.05□□□□□ -1.76
SSN8P47821 DRN1YGR093W 1524 nt4.05□□□□□ -1.76
SSN8P47821 SWC3YAL011W 1878 nt4.05□□□□□ -1.76
SSN8P47821 ATG2YNL242W 4779 nt4.05□□□□□ -1.76
SSN8P47821 LPP1YDR503C 825 nt4.04□□□□□ -1.76
SSN8P47821 SUT1YGL162W 900 nt4.04□□□□□ -1.76
SSN8P47821 YGL258W-AYGL258W-A 234 nt4.04□□□□□ -1.76
SSN8P47821 NAT2YGR147C 867 nt4.04□□□□□ -1.76
SSN8P47821 DCD1YHR144C 939 nt4.04□□□□□ -1.76
SSN8P47821 YJR012CYJR012C 624 nt4.04□□□□□ -1.76
SSN8P47821 KTR2YKR061W 1278 nt4.04□□□□□ -1.76
SSN8P47821 MRPL37YBR268W 318 nt4.04□□□□□ -1.76
SSN8P47821 BUD7YOR299W 2241 nt4.04□□□□□ -1.76
SSN8P47821 TYR1YBR166C 1359 nt4.03□□□□□ -1.76
SSN8P47821 RAD30YDR419W 1899 nt4.03□□□□□ -1.76
SSN8P47821 RIP1YEL024W 648 nt4.03□□□□□ -1.76
SSN8P47821 ARO2YGL148W 1131 nt4.03□□□□□ -1.76
SSN8P47821 YHR112CYHR112C 1137 nt4.03□□□□□ -1.76
SSN8P47821 YJR056CYJR056C 711 nt4.03□□□□□ -1.76
SSN8P47821 YKL071WYKL071W 771 nt4.03□□□□□ -1.76
SSN8P47821 SPS19YNL202W 879 nt4.03□□□□□ -1.76
SSN8P47821 DSC2YOL073C 969 nt4.03□□□□□ -1.76
SSN8P47821 YBR056W-AYBR056W-A 201 nt4.03□□□□□ -1.76
SSN8P47821 HSP26YBR072W 645 nt4.03□□□□□ -1.76
SSN8P47821 NUP2YLR335W 2163 nt4.03□□□□□ -1.76
SSN8P47821 TFA1YKL028W 1449 nt4.03□□□□□ -1.76
SSN8P47821 ENT1YDL161W 1365 nt4.02□□□□□ -1.77
SSN8P47821 NTH1YDR001C 2256 nt4.02□□□□□ -1.77
SSN8P47821 RIA1YNL163C 3333 nt4.02□□□□□ -1.77
SSN8P47821 RRI1YDL216C 1323 nt4.02□□□□□ -1.77
SSN8P47821 SWI1YPL016W 3945 nt4.02□□□□□ -1.77
SSN8P47821 CDC6YJL194W 1542 nt4.02□□□□□ -1.77
SSN8P47821 HNT2YDR305C 654 nt4.02□□□□□ -1.77
SSN8P47821 COX2Q0250 756 nt4.02□□□□□ -1.77
SSN8P47821 DID4YKL002W 699 nt4.02□□□□□ -1.77
SSN8P47821 LDB18YLL049W 540 nt4.02□□□□□ -1.77
SSN8P47821 NSE1YLR007W 1011 nt4.02□□□□□ -1.77
SSN8P47821 IES3YLR052W 753 nt4.02□□□□□ -1.77
SSN8P47821 YAR019W-AYAR019W-A 333 nt4.02□□□□□ -1.77
SSN8P47821 CDC42YLR229C 576 nt4.02□□□□□ -1.77
SSN8P47821 YBL006W-AYBL006W-A 150 nt4.02□□□□□ -1.77
SSN8P47821 PAH1YMR165C 2589 nt4.02□□□□□ -1.77
SSN8P47821 KRE29YER038C 1395 nt4.02□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms