Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PTPN6P29350 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPN6P29350 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPN6P29350 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.05■□□□□ 0.96
PTPN6P29350 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.05■□□□□ 0.96
PTPN6P29350 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.05■□□□□ 0.96
PTPN6P29350 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPN6P29350 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.04■□□□□ 0.96
PTPN6P29350 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PTPN6P29350 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN6P29350 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN6P29350 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN6P29350 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN6P29350 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN6P29350 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PTPN6P29350 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PTPN6P29350 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN6P29350 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN6P29350 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN6P29350 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN6P29350 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPN6P29350 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPN6P29350 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN6P29350 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN6P29350 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN6P29350 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN6P29350 MTDHP2-201ENST00000601468 714 ntBASIC21.03■□□□□ 0.96
PTPN6P29350 AC010997.5-201ENST00000609182 354 ntBASIC21.03■□□□□ 0.96
PTPN6P29350 AC137767.1-201ENST00000602918 1920 ntBASIC21.03■□□□□ 0.96
PTPN6P29350 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN6P29350 AC144652.1-201ENST00000609974 1624 ntBASIC21.03■□□□□ 0.96
PTPN6P29350 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN6P29350 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PTPN6P29350 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN6P29350 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN6P29350 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.02■□□□□ 0.96
PTPN6P29350 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.02■□□□□ 0.96
PTPN6P29350 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PTPN6P29350 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN6P29350 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN6P29350 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
PTPN6P29350 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PTPN6P29350 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PTPN6P29350 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN6P29350 AC087742.1-201ENST00000575880 1738 ntBASIC21.01■□□□□ 0.95
PTPN6P29350 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN6P29350 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
PTPN6P29350 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN6P29350 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.01■□□□□ 0.95
PTPN6P29350 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN6P29350 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPN6P29350 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN6P29350 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN6P29350 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN6P29350 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN6P29350 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN6P29350 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN6P29350 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21■□□□□ 0.95
PTPN6P29350 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PTPN6P29350 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21■□□□□ 0.95
PTPN6P29350 AC131212.1-201ENST00000613771 668 ntBASIC21■□□□□ 0.95
PTPN6P29350 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN6P29350 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN6P29350 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN6P29350 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN6P29350 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN6P29350 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN6P29350 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN6P29350 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN6P29350 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN6P29350 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN6P29350 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN6P29350 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN6P29350 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN6P29350 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN6P29350 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN6P29350 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN6P29350 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN6P29350 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN6P29350 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN6P29350 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN6P29350 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN6P29350 AC080038.3-201ENST00000623346 1952 ntBASIC20.98■□□□□ 0.95
PTPN6P29350 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms