Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCL1P22362 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL1P22362 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL1P22362 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL1P22362 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL1P22362 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.13■□□□□ 0.65
CCL1P22362 MTDHP2-201ENST00000601468 714 ntBASIC19.13■□□□□ 0.65
CCL1P22362 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL1P22362 AC009102.2-201ENST00000606772 1639 ntBASIC19.13■□□□□ 0.65
CCL1P22362 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CCL1P22362 AC092053.2-201ENST00000640557 1818 ntBASIC19.13■□□□□ 0.65
CCL1P22362 AC080038.3-201ENST00000623346 1952 ntBASIC19.13■□□□□ 0.65
CCL1P22362 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCL1P22362 CLDN5-201ENST00000403084 2357 ntBASIC19.13■□□□□ 0.65
CCL1P22362 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.12■□□□□ 0.65
CCL1P22362 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL1P22362 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CCL1P22362 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.12■□□□□ 0.65
CCL1P22362 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL1P22362 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCL1P22362 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.11■□□□□ 0.65
CCL1P22362 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.11■□□□□ 0.65
CCL1P22362 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL1P22362 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.11■□□□□ 0.65
CCL1P22362 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL1P22362 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL1P22362 MIR4787-201ENST00000607364 84 ntBASIC19.11■□□□□ 0.65
CCL1P22362 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.11■□□□□ 0.65
CCL1P22362 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCL1P22362 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCL1P22362 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL1P22362 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.11■□□□□ 0.65
CCL1P22362 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCL1P22362 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CCL1P22362 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL1P22362 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCL1P22362 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL1P22362 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.1■□□□□ 0.65
CCL1P22362 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.1■□□□□ 0.65
CCL1P22362 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCL1P22362 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.1■□□□□ 0.65
CCL1P22362 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL1P22362 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCL1P22362 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCL1P22362 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCL1P22362 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCL1P22362 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCL1P22362 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.09■□□□□ 0.65
CCL1P22362 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.09■□□□□ 0.65
CCL1P22362 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCL1P22362 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CCL1P22362 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCL1P22362 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCL1P22362 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.09■□□□□ 0.65
CCL1P22362 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.09■□□□□ 0.65
CCL1P22362 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCL1P22362 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CCL1P22362 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCL1P22362 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCL1P22362 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCL1P22362 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.08■□□□□ 0.64
CCL1P22362 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCL1P22362 RARRES2P1-201ENST00000474487 481 ntBASIC19.08■□□□□ 0.64
CCL1P22362 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.08■□□□□ 0.64
CCL1P22362 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCL1P22362 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCL1P22362 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCL1P22362 C17orf82-201ENST00000623772 1530 ntBASIC19.08■□□□□ 0.64
CCL1P22362 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCL1P22362 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCL1P22362 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CCL1P22362 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CCL1P22362 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCL1P22362 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL1P22362 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL1P22362 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL1P22362 LINC01960-201ENST00000563759 1884 ntBASIC19.07■□□□□ 0.64
CCL1P22362 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.07■□□□□ 0.64
CCL1P22362 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.07■□□□□ 0.64
CCL1P22362 C11orf96-202ENST00000528572 1834 ntBASIC19.07■□□□□ 0.64
CCL1P22362 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCL1P22362 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL1P22362 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL1P22362 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.07■□□□□ 0.64
CCL1P22362 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL1P22362 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.07■□□□□ 0.64
CCL1P22362 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCL1P22362 AC010997.5-201ENST00000609182 354 ntBASIC19.07■□□□□ 0.64
CCL1P22362 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL1P22362 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCL1P22362 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms