Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 MCK1YNL307C 1128 nt4.37□□□□□ -1.71
TY4B-HP0C2J7 YOR073W-AYOR073W-A 234 nt4.37□□□□□ -1.71
TY4B-HP0C2J7 VTH1YIL173W 4650 nt4.36□□□□□ -1.71
TY4B-HP0C2J7 VTH2YJL222W 4650 nt4.36□□□□□ -1.71
TY4B-HP0C2J7 DUR1,2YBR208C 5508 nt4.36□□□□□ -1.71
TY4B-HP0C2J7 DRS2YAL026C 4068 nt4.36□□□□□ -1.71
TY4B-HP0C2J7 SFI1YLL003W 2841 nt4.36□□□□□ -1.71
TY4B-HP0C2J7 APC9YLR102C 798 nt4.36□□□□□ -1.71
TY4B-HP0C2J7 UTP23YOR004W 765 nt4.36□□□□□ -1.71
TY4B-HP0C2J7 STR2YJR130C 1920 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 CDS1YBR029C 1374 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 FAD1YDL045C 921 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 IRC18YJL037W 675 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 MAK16YAL025C 921 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 YJR085CYJR085C 318 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 YJR128WYJR128W 360 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 GPI12YMR281W 915 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 PSF3YOL146W 585 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 RPS9BYBR189W 588 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 TAF8YML114C 1533 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 OAF1YAL051W 3144 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 PRP43YGL120C 2304 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 YPP1YGR198W 2454 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 MPA43YNL249C 1629 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 PEX7YDR142C 1128 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 DAM1YGR113W 1032 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 TEM1YML064C 738 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 HOT1YMR172W 2160 nt4.35□□□□□ -1.71
TY4B-HP0C2J7 MET10YFR030W 3108 nt4.34□□□□□ -1.71
TY4B-HP0C2J7 PMC1YGL006W 3522 nt4.34□□□□□ -1.71
TY4B-HP0C2J7 EXO5YBR163W 1758 nt4.34□□□□□ -1.71
TY4B-HP0C2J7 YFL052WYFL052W 1398 nt4.34□□□□□ -1.71
TY4B-HP0C2J7 NOC2YOR206W 2133 nt4.34□□□□□ -1.71
TY4B-HP0C2J7 HOM3YER052C 1584 nt4.34□□□□□ -1.72
TY4B-HP0C2J7 EMW1YNL313C 2715 nt4.34□□□□□ -1.72
TY4B-HP0C2J7 ARC15YIL062C 465 nt4.33□□□□□ -1.72
TY4B-HP0C2J7 YBL039W-BYBL039W-B 180 nt4.33□□□□□ -1.72
TY4B-HP0C2J7 YFR006WYFR006W 1608 nt4.33□□□□□ -1.72
TY4B-HP0C2J7 VAC8YEL013W 1737 nt4.33□□□□□ -1.72
TY4B-HP0C2J7 MSS1YMR023C 1581 nt4.33□□□□□ -1.72
TY4B-HP0C2J7 PAM1YDR251W 2493 nt4.33□□□□□ -1.72
TY4B-HP0C2J7 YNL320WYNL320W 855 nt4.32□□□□□ -1.72
TY4B-HP0C2J7 ASN1YPR145W 1719 nt4.32□□□□□ -1.72
TY4B-HP0C2J7 PAP2YOL115W 1755 nt4.32□□□□□ -1.72
TY4B-HP0C2J7 tF(GAA)DtF(GAA)D 73 nt4.32□□□□□ -1.72
TY4B-HP0C2J7 tF(GAA)NtF(GAA)N 73 nt4.32□□□□□ -1.72
TY4B-HP0C2J7 MLH2YLR035C 2088 nt4.31□□□□□ -1.72
TY4B-HP0C2J7 MRPL11YDL202W 750 nt4.31□□□□□ -1.72
TY4B-HP0C2J7 TGS1YPL157W 948 nt4.31□□□□□ -1.72
TY4B-HP0C2J7 snR42snR42 351 nt4.31□□□□□ -1.72
TY4B-HP0C2J7 COS8YHL048W 1146 nt4.3□□□□□ -1.72
TY4B-HP0C2J7 SOP4YJL192C 705 nt4.3□□□□□ -1.72
TY4B-HP0C2J7 YMR317WYMR317W 3423 nt4.3□□□□□ -1.72
TY4B-HP0C2J7 MRH1YDR033W 963 nt4.3□□□□□ -1.72
TY4B-HP0C2J7 PPX1YHR201C 1194 nt4.3□□□□□ -1.72
TY4B-HP0C2J7 THI20YOL055C 1656 nt4.29□□□□□ -1.72
TY4B-HP0C2J7 SHO1YER118C 1104 nt4.29□□□□□ -1.72
TY4B-HP0C2J7 YHL049CYHL049C 816 nt4.29□□□□□ -1.72
TY4B-HP0C2J7 COX14YML129C 213 nt4.29□□□□□ -1.72
TY4B-HP0C2J7 PRP40YKL012W 1752 nt4.29□□□□□ -1.72
TY4B-HP0C2J7 YJL175WYJL175W 513 nt4.28□□□□□ -1.72
TY4B-HP0C2J7 PCA1YBR295W 3651 nt4.28□□□□□ -1.72
TY4B-HP0C2J7 GRC3YLL035W 1899 nt4.28□□□□□ -1.72
TY4B-HP0C2J7 NOP4YPL043W 2058 nt4.28□□□□□ -1.72
TY4B-HP0C2J7 CAX4YGR036C 720 nt4.28□□□□□ -1.72
TY4B-HP0C2J7 NOP7YGR103W 1818 nt4.28□□□□□ -1.72
TY4B-HP0C2J7 PAN5YHR063C 1140 nt4.28□□□□□ -1.72
TY4B-HP0C2J7 GOT1YMR292W 417 nt4.28□□□□□ -1.72
TY4B-HP0C2J7 MDM12YOL009C 816 nt4.28□□□□□ -1.72
TY4B-HP0C2J7 FAS2YPL231W 5664 nt4.27□□□□□ -1.73
TY4B-HP0C2J7 EMP70YLR083C 2004 nt4.27□□□□□ -1.73
TY4B-HP0C2J7 MBB1YJL199C 327 nt4.27□□□□□ -1.73
TY4B-HP0C2J7 TIF4632YGL049C 2745 nt4.27□□□□□ -1.73
TY4B-HP0C2J7 YOL153CYOL153C 1746 nt4.27□□□□□ -1.73
TY4B-HP0C2J7 ARG5,6YER069W 2592 nt4.27□□□□□ -1.73
TY4B-HP0C2J7 GAL11YOL051W 3246 nt4.26□□□□□ -1.73
TY4B-HP0C2J7 ELM1YKL048C 1923 nt4.26□□□□□ -1.73
TY4B-HP0C2J7 MRP13YGR084C 1020 nt4.26□□□□□ -1.73
TY4B-HP0C2J7 MRPL16YBL038W 699 nt4.26□□□□□ -1.73
TY4B-HP0C2J7 YPL113CYPL113C 1191 nt4.26□□□□□ -1.73
TY4B-HP0C2J7 tK(UUU)DtK(UUU)D 73 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 tK(UUU)G1tK(UUU)G1 73 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 tK(UUU)G2tK(UUU)G2 73 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 tK(UUU)KtK(UUU)K 73 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 tK(UUU)LtK(UUU)L 73 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 tK(UUU)OtK(UUU)O 73 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 tK(UUU)PtK(UUU)P 73 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 RPL30YGL030W 318 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 MED7YOL135C 669 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 ARR1YPR199C 885 nt4.25□□□□□ -1.73
TY4B-HP0C2J7 COA4YLR218C 453 nt4.24□□□□□ -1.73
TY4B-HP0C2J7 RRN11YML043C 1524 nt4.24□□□□□ -1.73
TY4B-HP0C2J7 SMC3YJL074C 3693 nt4.24□□□□□ -1.73
TY4B-HP0C2J7 RPB2YOR151C 3675 nt4.24□□□□□ -1.73
TY4B-HP0C2J7 OMS1YDR316W 1416 nt4.24□□□□□ -1.73
TY4B-HP0C2J7 SYT1YPR095C 3681 nt4.24□□□□□ -1.73
TY4B-HP0C2J7 YLH47YPR125W 1365 nt4.23□□□□□ -1.73
TY4B-HP0C2J7 YER084WYER084W 387 nt4.23□□□□□ -1.73
TY4B-HP0C2J7 YRA2YKL214C 612 nt4.23□□□□□ -1.73
TY4B-HP0C2J7 RIM21YNL294C 1602 nt4.22□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 68.9 ms