Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SNRPA1P09661 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SNRPA1P09661 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SNRPA1P09661 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SNRPA1P09661 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SNRPA1P09661 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
SNRPA1P09661 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNRPA1P09661 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SNRPA1P09661 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
SNRPA1P09661 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNRPA1P09661 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
SNRPA1P09661 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNRPA1P09661 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNRPA1P09661 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
SNRPA1P09661 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
SNRPA1P09661 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SNRPA1P09661 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SNRPA1P09661 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
SNRPA1P09661 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SNRPA1P09661 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SNRPA1P09661 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SNRPA1P09661 CCDC92B-201ENST00000575506 885 ntBASIC28.48■■■□□ 2.15
SNRPA1P09661 AC022517.1-201ENST00000592429 346 ntBASIC28.48■■■□□ 2.15
SNRPA1P09661 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.48■■■□□ 2.15
SNRPA1P09661 ABCB10P4-201ENST00000566803 2184 ntBASIC28.48■■■□□ 2.15
SNRPA1P09661 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SNRPA1P09661 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SNRPA1P09661 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SNRPA1P09661 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC28.47■■■□□ 2.15
SNRPA1P09661 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC28.47■■■□□ 2.15
SNRPA1P09661 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNRPA1P09661 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC28.46■■■□□ 2.15
SNRPA1P09661 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNRPA1P09661 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.46■■■□□ 2.15
SNRPA1P09661 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
SNRPA1P09661 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNRPA1P09661 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNRPA1P09661 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC28.46■■■□□ 2.15
SNRPA1P09661 AC105233.4-201ENST00000642045 216 ntBASIC28.46■■■□□ 2.15
SNRPA1P09661 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNRPA1P09661 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SNRPA1P09661 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNRPA1P09661 MPST-204ENST00000404393 1329 ntTSL 5 BASIC28.45■■■□□ 2.15
SNRPA1P09661 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
SNRPA1P09661 AL353803.4-201ENST00000565882 1934 ntBASIC28.45■■■□□ 2.15
SNRPA1P09661 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SNRPA1P09661 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.45■■■□□ 2.15
SNRPA1P09661 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
SNRPA1P09661 AC004687.1-201ENST00000579003 1625 ntBASIC28.45■■■□□ 2.14
SNRPA1P09661 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.45■■■□□ 2.14
SNRPA1P09661 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SNRPA1P09661 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SNRPA1P09661 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SNRPA1P09661 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
SNRPA1P09661 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.45■■■□□ 2.14
SNRPA1P09661 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SNRPA1P09661 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SNRPA1P09661 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.44■■■□□ 2.14
SNRPA1P09661 TERF1P2-201ENST00000583350 1212 ntBASIC28.44■■■□□ 2.14
SNRPA1P09661 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC28.44■■■□□ 2.14
SNRPA1P09661 LINC02228-203ENST00000641970 1355 ntBASIC28.44■■■□□ 2.14
SNRPA1P09661 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNRPA1P09661 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.43■■■□□ 2.14
SNRPA1P09661 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNRPA1P09661 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC28.43■■■□□ 2.14
SNRPA1P09661 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.43■■■□□ 2.14
SNRPA1P09661 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.43■■■□□ 2.14
SNRPA1P09661 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SNRPA1P09661 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC28.43■■■□□ 2.14
SNRPA1P09661 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.43■■■□□ 2.14
SNRPA1P09661 IKBKGP1-201ENST00000612193 1073 ntBASIC28.43■■■□□ 2.14
SNRPA1P09661 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
SNRPA1P09661 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
SNRPA1P09661 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
SNRPA1P09661 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNRPA1P09661 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC28.43■■■□□ 2.14
SNRPA1P09661 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNRPA1P09661 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNRPA1P09661 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNRPA1P09661 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28.42■■■□□ 2.14
SNRPA1P09661 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC28.42■■■□□ 2.14
SNRPA1P09661 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.42■■■□□ 2.14
SNRPA1P09661 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC28.42■■■□□ 2.14
SNRPA1P09661 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.42■■■□□ 2.14
SNRPA1P09661 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNRPA1P09661 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SNRPA1P09661 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNRPA1P09661 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNRPA1P09661 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.42■■■□□ 2.14
SNRPA1P09661 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.41■■■□□ 2.14
SNRPA1P09661 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.41■■■□□ 2.14
SNRPA1P09661 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.41■■■□□ 2.14
SNRPA1P09661 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.41■■■□□ 2.14
SNRPA1P09661 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNRPA1P09661 KRT18P14-201ENST00000534205 1250 ntBASIC28.41■■■□□ 2.14
SNRPA1P09661 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.41■■■□□ 2.14
SNRPA1P09661 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNRPA1P09661 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNRPA1P09661 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.4■■■□□ 2.14
SNRPA1P09661 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms