Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ERCC1P07992 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ERCC1P07992 AC131274.2-201ENST00000580697 1507 ntBASIC19.52■□□□□ 0.72
ERCC1P07992 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC1P07992 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC1P07992 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ERCC1P07992 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.52■□□□□ 0.72
ERCC1P07992 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.52■□□□□ 0.72
ERCC1P07992 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
ERCC1P07992 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC1P07992 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ERCC1P07992 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
ERCC1P07992 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
ERCC1P07992 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ERCC1P07992 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ERCC1P07992 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ERCC1P07992 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ERCC1P07992 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.51■□□□□ 0.71
ERCC1P07992 SRD5A1P1-201ENST00000442297 786 ntBASIC19.51■□□□□ 0.71
ERCC1P07992 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.51■□□□□ 0.71
ERCC1P07992 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.51■□□□□ 0.71
ERCC1P07992 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ERCC1P07992 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.51■□□□□ 0.71
ERCC1P07992 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.51■□□□□ 0.71
ERCC1P07992 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC1P07992 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC1P07992 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC1P07992 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC1P07992 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
ERCC1P07992 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.5■□□□□ 0.71
ERCC1P07992 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ERCC1P07992 AL139246.5-201ENST00000606645 996 ntBASIC19.5■□□□□ 0.71
ERCC1P07992 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ERCC1P07992 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC1P07992 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC1P07992 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ERCC1P07992 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 C1orf229-201ENST00000623686 2258 ntBASIC19.49■□□□□ 0.71
ERCC1P07992 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.49■□□□□ 0.71
ERCC1P07992 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.49■□□□□ 0.71
ERCC1P07992 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.49■□□□□ 0.71
ERCC1P07992 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC1P07992 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC1P07992 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC1P07992 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ERCC1P07992 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ERCC1P07992 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ERCC1P07992 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.48■□□□□ 0.71
ERCC1P07992 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.48■□□□□ 0.71
ERCC1P07992 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.48■□□□□ 0.71
ERCC1P07992 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC1P07992 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC1P07992 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC1P07992 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ERCC1P07992 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC1P07992 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC1P07992 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC1P07992 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC1P07992 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC1P07992 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ERCC1P07992 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC1P07992 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC1P07992 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.47■□□□□ 0.71
ERCC1P07992 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.47■□□□□ 0.71
ERCC1P07992 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.47■□□□□ 0.71
ERCC1P07992 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ERCC1P07992 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC1P07992 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC1P07992 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ERCC1P07992 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC1P07992 AL512631.2-201ENST00000604634 923 ntBASIC19.46■□□□□ 0.71
ERCC1P07992 MIR4466-201ENST00000606121 54 ntBASIC19.46■□□□□ 0.71
ERCC1P07992 AC092171.4-201ENST00000609130 632 ntBASIC19.46■□□□□ 0.71
ERCC1P07992 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ERCC1P07992 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC1P07992 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ERCC1P07992 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms