Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.23■■□□□ 1.79
COL2A1P02458 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.23■■□□□ 1.79
COL2A1P02458 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.23■■□□□ 1.79
COL2A1P02458 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.23■■□□□ 1.79
COL2A1P02458 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.23■■□□□ 1.79
COL2A1P02458 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.23■■□□□ 1.79
COL2A1P02458 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.23■■□□□ 1.79
COL2A1P02458 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
COL2A1P02458 AC022517.1-201ENST00000592429 346 ntBASIC26.23■■□□□ 1.79
COL2A1P02458 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 LINC02228-203ENST00000641970 1355 ntBASIC26.23■■□□□ 1.79
COL2A1P02458 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
COL2A1P02458 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.23■■□□□ 1.79
COL2A1P02458 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.23■■□□□ 1.79
COL2A1P02458 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.23■■□□□ 1.79
COL2A1P02458 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.23■■□□□ 1.79
COL2A1P02458 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.23■■□□□ 1.79
COL2A1P02458 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.23■■□□□ 1.79
COL2A1P02458 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.23■■□□□ 1.79
COL2A1P02458 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL2A1P02458 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.23■■□□□ 1.79
COL2A1P02458 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.23■■□□□ 1.79
COL2A1P02458 TPRG1LP1-201ENST00000598702 760 ntBASIC26.23■■□□□ 1.79
COL2A1P02458 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.23■■□□□ 1.79
COL2A1P02458 AC105233.4-201ENST00000642045 216 ntBASIC26.23■■□□□ 1.79
COL2A1P02458 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL2A1P02458 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL2A1P02458 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.22■■□□□ 1.79
COL2A1P02458 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
COL2A1P02458 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.22■■□□□ 1.79
COL2A1P02458 IKBKGP1-201ENST00000612193 1073 ntBASIC26.22■■□□□ 1.79
COL2A1P02458 AC068587.7-201ENST00000641602 218 ntBASIC26.22■■□□□ 1.79
COL2A1P02458 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.22■■□□□ 1.79
COL2A1P02458 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL2A1P02458 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
COL2A1P02458 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL2A1P02458 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL2A1P02458 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL2A1P02458 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL2A1P02458 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL2A1P02458 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
COL2A1P02458 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.21■■□□□ 1.79
COL2A1P02458 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.21■■□□□ 1.79
COL2A1P02458 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.21■■□□□ 1.79
COL2A1P02458 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL2A1P02458 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.2■■□□□ 1.78
COL2A1P02458 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL2A1P02458 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.2■■□□□ 1.78
COL2A1P02458 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.2■■□□□ 1.78
COL2A1P02458 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL2A1P02458 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.2■■□□□ 1.78
COL2A1P02458 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.2■■□□□ 1.78
COL2A1P02458 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.2■■□□□ 1.78
COL2A1P02458 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL2A1P02458 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL2A1P02458 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL2A1P02458 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.19■■□□□ 1.78
COL2A1P02458 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL2A1P02458 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL2A1P02458 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL2A1P02458 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL2A1P02458 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.18■■□□□ 1.78
COL2A1P02458 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL2A1P02458 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.17■■□□□ 1.78
COL2A1P02458 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 AC004687.1-201ENST00000579003 1625 ntBASIC26.17■■□□□ 1.78
COL2A1P02458 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
COL2A1P02458 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
COL2A1P02458 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
COL2A1P02458 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
COL2A1P02458 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
COL2A1P02458 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL2A1P02458 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.16■■□□□ 1.78
COL2A1P02458 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL2A1P02458 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL2A1P02458 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
COL2A1P02458 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.16■■□□□ 1.78
COL2A1P02458 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.16■■□□□ 1.78
COL2A1P02458 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL2A1P02458 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
COL2A1P02458 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL2A1P02458 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.15■■□□□ 1.78
COL2A1P02458 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL2A1P02458 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms