Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.67■■□□□ 1.7
ALDH1A1P00352 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ALDH1A1P00352 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.67■■□□□ 1.7
ALDH1A1P00352 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.66■■□□□ 1.7
ALDH1A1P00352 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
ALDH1A1P00352 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.66■■□□□ 1.7
ALDH1A1P00352 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.66■■□□□ 1.7
ALDH1A1P00352 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.66■■□□□ 1.7
ALDH1A1P00352 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.66■■□□□ 1.7
ALDH1A1P00352 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ALDH1A1P00352 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ALDH1A1P00352 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ALDH1A1P00352 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ALDH1A1P00352 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ALDH1A1P00352 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ALDH1A1P00352 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ALDH1A1P00352 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
ALDH1A1P00352 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.65■■□□□ 1.7
ALDH1A1P00352 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.65■■□□□ 1.7
ALDH1A1P00352 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.65■■□□□ 1.7
ALDH1A1P00352 AC231657.2-201ENST00000624556 255 ntBASIC25.65■■□□□ 1.7
ALDH1A1P00352 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ALDH1A1P00352 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ALDH1A1P00352 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ALDH1A1P00352 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ALDH1A1P00352 LINC01529-204ENST00000636474 1715 ntBASIC25.64■■□□□ 1.7
ALDH1A1P00352 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ALDH1A1P00352 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.64■■□□□ 1.7
ALDH1A1P00352 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.64■■□□□ 1.7
ALDH1A1P00352 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
ALDH1A1P00352 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
ALDH1A1P00352 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
ALDH1A1P00352 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
ALDH1A1P00352 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.63■■□□□ 1.69
ALDH1A1P00352 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
ALDH1A1P00352 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
ALDH1A1P00352 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.63■■□□□ 1.69
ALDH1A1P00352 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.63■■□□□ 1.69
ALDH1A1P00352 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.63■■□□□ 1.69
ALDH1A1P00352 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.63■■□□□ 1.69
ALDH1A1P00352 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.63■■□□□ 1.69
ALDH1A1P00352 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ALDH1A1P00352 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
ALDH1A1P00352 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ALDH1A1P00352 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.62■■□□□ 1.69
ALDH1A1P00352 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ALDH1A1P00352 AC093827.2-201ENST00000512654 315 ntBASIC25.62■■□□□ 1.69
ALDH1A1P00352 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.62■■□□□ 1.69
ALDH1A1P00352 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.62■■□□□ 1.69
ALDH1A1P00352 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.62■■□□□ 1.69
ALDH1A1P00352 MFSD11-216ENST00000590393 1141 ntBASIC25.62■■□□□ 1.69
ALDH1A1P00352 AL050303.2-201ENST00000619798 666 ntBASIC25.62■■□□□ 1.69
ALDH1A1P00352 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ALDH1A1P00352 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ALDH1A1P00352 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.61■■□□□ 1.69
ALDH1A1P00352 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ALDH1A1P00352 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
ALDH1A1P00352 SLC29A4P1-201ENST00000398760 971 ntBASIC25.61■■□□□ 1.69
ALDH1A1P00352 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ALDH1A1P00352 SLC7A5P2-201ENST00000553010 536 ntBASIC25.61■■□□□ 1.69
ALDH1A1P00352 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.61■■□□□ 1.69
ALDH1A1P00352 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.61■■□□□ 1.69
ALDH1A1P00352 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ALDH1A1P00352 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
ALDH1A1P00352 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
ALDH1A1P00352 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.6■■□□□ 1.69
ALDH1A1P00352 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
ALDH1A1P00352 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ALDH1A1P00352 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
ALDH1A1P00352 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ALDH1A1P00352 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ALDH1A1P00352 AC079140.4-201ENST00000507448 529 ntBASIC25.6■■□□□ 1.69
ALDH1A1P00352 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.6■■□□□ 1.69
ALDH1A1P00352 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.6■■□□□ 1.69
ALDH1A1P00352 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.6■■□□□ 1.69
ALDH1A1P00352 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.6■■□□□ 1.69
ALDH1A1P00352 AC068587.7-201ENST00000641602 218 ntBASIC25.6■■□□□ 1.69
ALDH1A1P00352 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ALDH1A1P00352 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ALDH1A1P00352 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ALDH1A1P00352 GUSBP6-202ENST00000438529 1198 ntBASIC25.59■■□□□ 1.69
ALDH1A1P00352 MIR4651-201ENST00000582622 73 ntBASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms