Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.28■□□□□ 0.36
TOMM40O96008 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.28■□□□□ 0.36
TOMM40O96008 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOMM40O96008 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.28■□□□□ 0.36
TOMM40O96008 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOMM40O96008 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOMM40O96008 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
TOMM40O96008 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.27■□□□□ 0.36
TOMM40O96008 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOMM40O96008 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TOMM40O96008 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.27■□□□□ 0.36
TOMM40O96008 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.27■□□□□ 0.36
TOMM40O96008 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOMM40O96008 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOMM40O96008 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TOMM40O96008 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOMM40O96008 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOMM40O96008 MIR6722-201ENST00000617286 78 ntBASIC17.27■□□□□ 0.36
TOMM40O96008 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOMM40O96008 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TOMM40O96008 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOMM40O96008 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOMM40O96008 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOMM40O96008 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOMM40O96008 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOMM40O96008 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOMM40O96008 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TOMM40O96008 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
TOMM40O96008 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOMM40O96008 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOMM40O96008 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOMM40O96008 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TOMM40O96008 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOMM40O96008 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOMM40O96008 AC005703.6-201ENST00000623265 1329 ntBASIC17.26■□□□□ 0.35
TOMM40O96008 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOMM40O96008 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.26■□□□□ 0.35
TOMM40O96008 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOMM40O96008 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOMM40O96008 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.26■□□□□ 0.35
TOMM40O96008 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOMM40O96008 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOMM40O96008 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOMM40O96008 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.26■□□□□ 0.35
TOMM40O96008 BX664725.1-201ENST00000438252 379 ntBASIC17.26■□□□□ 0.35
TOMM40O96008 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.26■□□□□ 0.35
TOMM40O96008 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.26■□□□□ 0.35
TOMM40O96008 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.26■□□□□ 0.35
TOMM40O96008 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOMM40O96008 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.26■□□□□ 0.35
TOMM40O96008 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.26■□□□□ 0.35
TOMM40O96008 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.26■□□□□ 0.35
TOMM40O96008 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOMM40O96008 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOMM40O96008 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TOMM40O96008 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOMM40O96008 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOMM40O96008 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.25■□□□□ 0.35
TOMM40O96008 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.25■□□□□ 0.35
TOMM40O96008 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOMM40O96008 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TOMM40O96008 AC242852.2-201ENST00000615738 1807 ntBASIC17.25■□□□□ 0.35
TOMM40O96008 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOMM40O96008 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TOMM40O96008 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.25■□□□□ 0.35
TOMM40O96008 AC021242.3-201ENST00000607598 1377 ntBASIC17.25■□□□□ 0.35
TOMM40O96008 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOMM40O96008 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.25■□□□□ 0.35
TOMM40O96008 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.24■□□□□ 0.35
TOMM40O96008 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOMM40O96008 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOMM40O96008 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TOMM40O96008 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOMM40O96008 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.24■□□□□ 0.35
TOMM40O96008 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TOMM40O96008 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOMM40O96008 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOMM40O96008 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOMM40O96008 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOMM40O96008 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TOMM40O96008 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOMM40O96008 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOMM40O96008 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.23■□□□□ 0.35
TOMM40O96008 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOMM40O96008 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.23■□□□□ 0.35
TOMM40O96008 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOMM40O96008 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.23■□□□□ 0.35
TOMM40O96008 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOMM40O96008 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOMM40O96008 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOMM40O96008 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOMM40O96008 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOMM40O96008 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOMM40O96008 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOMM40O96008 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TOMM40O96008 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOMM40O96008 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOMM40O96008 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOMM40O96008 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOMM40O96008 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms