Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC080038.3-201ENST00000623346 1952 ntBASIC19.7■□□□□ 0.74
CDRT1O95170 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 AL022069.1-201ENST00000568025 1636 ntBASIC19.7■□□□□ 0.74
CDRT1O95170 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDRT1O95170 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.7■□□□□ 0.74
CDRT1O95170 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
CDRT1O95170 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.7■□□□□ 0.74
CDRT1O95170 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.7■□□□□ 0.74
CDRT1O95170 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.7■□□□□ 0.74
CDRT1O95170 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDRT1O95170 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDRT1O95170 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDRT1O95170 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDRT1O95170 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDRT1O95170 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDRT1O95170 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.69■□□□□ 0.74
CDRT1O95170 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.69■□□□□ 0.74
CDRT1O95170 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.69■□□□□ 0.74
CDRT1O95170 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.69■□□□□ 0.74
CDRT1O95170 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDRT1O95170 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.69■□□□□ 0.74
CDRT1O95170 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDRT1O95170 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDRT1O95170 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.69■□□□□ 0.74
CDRT1O95170 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.68■□□□□ 0.74
CDRT1O95170 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDRT1O95170 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDRT1O95170 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDRT1O95170 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDRT1O95170 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDRT1O95170 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.67■□□□□ 0.74
CDRT1O95170 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.67■□□□□ 0.74
CDRT1O95170 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 ALDH1A3-203ENST00000557963 1670 ntBASIC19.67■□□□□ 0.74
CDRT1O95170 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDRT1O95170 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
CDRT1O95170 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDRT1O95170 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 AC087393.1-201ENST00000582896 145 ntBASIC19.66■□□□□ 0.74
CDRT1O95170 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.66■□□□□ 0.74
CDRT1O95170 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CDRT1O95170 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.66■□□□□ 0.74
CDRT1O95170 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDRT1O95170 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.66■□□□□ 0.74
CDRT1O95170 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.66■□□□□ 0.74
CDRT1O95170 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CDRT1O95170 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.66■□□□□ 0.74
CDRT1O95170 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CDRT1O95170 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.66■□□□□ 0.74
CDRT1O95170 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.66■□□□□ 0.74
CDRT1O95170 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDRT1O95170 AC073130.3-201ENST00000624389 2278 ntBASIC19.65■□□□□ 0.74
CDRT1O95170 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDRT1O95170 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDRT1O95170 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDRT1O95170 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDRT1O95170 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDRT1O95170 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDRT1O95170 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CDRT1O95170 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDRT1O95170 DUX4L9-201ENST00000449051 1259 ntBASIC19.65■□□□□ 0.74
CDRT1O95170 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDRT1O95170 MIR6765-201ENST00000614092 87 ntBASIC19.65■□□□□ 0.74
CDRT1O95170 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDRT1O95170 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.65■□□□□ 0.74
CDRT1O95170 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDRT1O95170 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDRT1O95170 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.65■□□□□ 0.74
CDRT1O95170 AL592295.1-201ENST00000400984 884 ntBASIC19.64■□□□□ 0.73
CDRT1O95170 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.64■□□□□ 0.73
CDRT1O95170 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms