Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.68■□□□□ 0.42
NDUFA3O95167 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
NDUFA3O95167 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NDUFA3O95167 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA3O95167 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA3O95167 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.68■□□□□ 0.42
NDUFA3O95167 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA3O95167 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NDUFA3O95167 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.68■□□□□ 0.42
NDUFA3O95167 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.68■□□□□ 0.42
NDUFA3O95167 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NDUFA3O95167 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA3O95167 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.68■□□□□ 0.42
NDUFA3O95167 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA3O95167 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NDUFA3O95167 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NDUFA3O95167 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.68■□□□□ 0.42
NDUFA3O95167 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.67■□□□□ 0.42
NDUFA3O95167 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NDUFA3O95167 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.67■□□□□ 0.42
NDUFA3O95167 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NDUFA3O95167 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 AC006455.2-201ENST00000429931 906 ntBASIC17.67■□□□□ 0.42
NDUFA3O95167 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.67■□□□□ 0.42
NDUFA3O95167 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NDUFA3O95167 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.67■□□□□ 0.42
NDUFA3O95167 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA3O95167 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA3O95167 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NDUFA3O95167 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFA3O95167 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA3O95167 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFA3O95167 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA3O95167 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA3O95167 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA3O95167 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA3O95167 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA3O95167 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA3O95167 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NDUFA3O95167 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.65■□□□□ 0.42
NDUFA3O95167 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA3O95167 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NDUFA3O95167 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA3O95167 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.65■□□□□ 0.42
NDUFA3O95167 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA3O95167 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
NDUFA3O95167 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.65■□□□□ 0.42
NDUFA3O95167 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA3O95167 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA3O95167 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA3O95167 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFA3O95167 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NDUFA3O95167 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFA3O95167 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFA3O95167 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NDUFA3O95167 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFA3O95167 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.64■□□□□ 0.41
NDUFA3O95167 DUX4L19-201ENST00000557448 1267 ntBASIC17.64■□□□□ 0.41
NDUFA3O95167 pRNA.6-201ENST00000610482 90 ntBASIC17.64■□□□□ 0.41
NDUFA3O95167 pRNA.5-201ENST00000612139 90 ntBASIC17.64■□□□□ 0.41
NDUFA3O95167 pRNA.11-201ENST00000618423 90 ntBASIC17.64■□□□□ 0.41
NDUFA3O95167 pRNA.13-201ENST00000619112 90 ntBASIC17.64■□□□□ 0.41
NDUFA3O95167 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFA3O95167 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NDUFA3O95167 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFA3O95167 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.63■□□□□ 0.41
NDUFA3O95167 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NDUFA3O95167 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NDUFA3O95167 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA3O95167 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA3O95167 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA3O95167 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA3O95167 AL136116.3-201ENST00000402907 1138 ntBASIC17.63■□□□□ 0.41
NDUFA3O95167 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.63■□□□□ 0.41
NDUFA3O95167 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.63■□□□□ 0.41
NDUFA3O95167 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.63■□□□□ 0.41
NDUFA3O95167 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA3O95167 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA3O95167 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA3O95167 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA3O95167 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NDUFA3O95167 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA3O95167 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA3O95167 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NDUFA3O95167 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA3O95167 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA3O95167 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.62■□□□□ 0.41
NDUFA3O95167 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
NDUFA3O95167 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFA3O95167 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.62■□□□□ 0.41
NDUFA3O95167 AL138724.1-201ENST00000606771 1088 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms