Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RNF40O75150 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RNF40O75150 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF40O75150 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF40O75150 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF40O75150 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RNF40O75150 ZNRF2P3-201ENST00000424200 374 ntBASIC23.71■■□□□ 1.39
RNF40O75150 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF40O75150 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF40O75150 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF40O75150 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF40O75150 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
RNF40O75150 HLA-L-211ENST00000482052 1765 ntBASIC23.7■■□□□ 1.39
RNF40O75150 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RNF40O75150 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RNF40O75150 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RNF40O75150 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF40O75150 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF40O75150 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RNF40O75150 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
RNF40O75150 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RNF40O75150 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF40O75150 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RNF40O75150 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RNF40O75150 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RNF40O75150 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RNF40O75150 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF40O75150 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF40O75150 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF40O75150 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF40O75150 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF40O75150 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RNF40O75150 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF40O75150 ECEL1P1-201ENST00000373592 1742 ntBASIC23.69■■□□□ 1.38
RNF40O75150 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF40O75150 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF40O75150 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF40O75150 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF40O75150 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
RNF40O75150 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF40O75150 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
RNF40O75150 AL136162.1-201ENST00000607711 1078 ntBASIC23.68■■□□□ 1.38
RNF40O75150 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
RNF40O75150 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF40O75150 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF40O75150 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF40O75150 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF40O75150 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RNF40O75150 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF40O75150 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF40O75150 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
RNF40O75150 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF40O75150 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RNF40O75150 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF40O75150 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF40O75150 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF40O75150 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF40O75150 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF40O75150 SRD5A1P1-201ENST00000442297 786 ntBASIC23.66■■□□□ 1.38
RNF40O75150 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF40O75150 SLC25A24-204ENST00000569674 2357 ntBASIC23.66■■□□□ 1.38
RNF40O75150 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF40O75150 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF40O75150 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF40O75150 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF40O75150 AL137060.1-201ENST00000618151 2648 ntBASIC23.65■■□□□ 1.38
RNF40O75150 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF40O75150 AC135279.3-201ENST00000610945 1311 ntBASIC23.65■■□□□ 1.38
RNF40O75150 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF40O75150 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF40O75150 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF40O75150 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.65■■□□□ 1.38
RNF40O75150 AL031432.3-201ENST00000607698 485 ntBASIC23.65■■□□□ 1.38
RNF40O75150 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF40O75150 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
RNF40O75150 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
RNF40O75150 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RNF40O75150 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
RNF40O75150 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF40O75150 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF40O75150 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF40O75150 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF40O75150 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF40O75150 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF40O75150 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF40O75150 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF40O75150 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF40O75150 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF40O75150 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF40O75150 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
RNF40O75150 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RNF40O75150 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF40O75150 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.63■■□□□ 1.37
RNF40O75150 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF40O75150 RARRES2P6-201ENST00000567333 442 ntBASIC23.63■■□□□ 1.37
RNF40O75150 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF40O75150 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
RNF40O75150 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF40O75150 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF40O75150 ANOS2P-203ENST00000472227 1816 ntBASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms