Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.27■■□□□ 1.15
MID1O15344 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MID1O15344 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
MID1O15344 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MID1O15344 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MID1O15344 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MID1O15344 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.26■■□□□ 1.15
MID1O15344 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
MID1O15344 AP005435.1-201ENST00000529293 1178 ntBASIC22.26■■□□□ 1.15
MID1O15344 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MID1O15344 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.26■■□□□ 1.15
MID1O15344 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
MID1O15344 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MID1O15344 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.26■■□□□ 1.15
MID1O15344 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.25■■□□□ 1.15
MID1O15344 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.25■■□□□ 1.15
MID1O15344 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MID1O15344 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MID1O15344 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MID1O15344 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
MID1O15344 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.25■■□□□ 1.15
MID1O15344 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MID1O15344 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.25■■□□□ 1.15
MID1O15344 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.25■■□□□ 1.15
MID1O15344 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MID1O15344 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
MID1O15344 AL353803.4-201ENST00000565882 1934 ntBASIC22.25■■□□□ 1.15
MID1O15344 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MID1O15344 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
MID1O15344 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MID1O15344 AC004687.1-201ENST00000579003 1625 ntBASIC22.24■■□□□ 1.15
MID1O15344 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MID1O15344 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MID1O15344 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.24■■□□□ 1.15
MID1O15344 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.24■■□□□ 1.15
MID1O15344 AC027612.3-201ENST00000413684 1047 ntBASIC22.24■■□□□ 1.15
MID1O15344 AC034268.1-201ENST00000441047 882 ntBASIC22.24■■□□□ 1.15
MID1O15344 AL354811.1-201ENST00000610286 706 ntBASIC22.24■■□□□ 1.15
MID1O15344 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MID1O15344 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
MID1O15344 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
MID1O15344 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
MID1O15344 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
MID1O15344 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
MID1O15344 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
MID1O15344 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.23■■□□□ 1.15
MID1O15344 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.23■■□□□ 1.15
MID1O15344 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.23■■□□□ 1.15
MID1O15344 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.23■■□□□ 1.15
MID1O15344 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.23■■□□□ 1.15
MID1O15344 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
MID1O15344 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
MID1O15344 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
MID1O15344 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MID1O15344 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.22■■□□□ 1.15
MID1O15344 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.22■■□□□ 1.15
MID1O15344 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.22■■□□□ 1.15
MID1O15344 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MID1O15344 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
MID1O15344 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MID1O15344 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MID1O15344 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
MID1O15344 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MID1O15344 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
MID1O15344 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
MID1O15344 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.21■■□□□ 1.15
MID1O15344 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.21■■□□□ 1.15
MID1O15344 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.21■■□□□ 1.15
MID1O15344 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MID1O15344 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
MID1O15344 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MID1O15344 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
MID1O15344 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
MID1O15344 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.15
MID1O15344 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
MID1O15344 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MID1O15344 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
MID1O15344 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
MID1O15344 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.2■■□□□ 1.14
MID1O15344 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
MID1O15344 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
MID1O15344 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MID1O15344 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
MID1O15344 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 AC123595.1-201ENST00000440769 1046 ntBASIC22.19■■□□□ 1.14
MID1O15344 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.19■■□□□ 1.14
MID1O15344 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.19■■□□□ 1.14
MID1O15344 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.19■■□□□ 1.14
MID1O15344 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.19■■□□□ 1.14
MID1O15344 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MID1O15344 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms