Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.42■■■□□ 2.62
CHD2O14647 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC31.42■■■□□ 2.62
CHD2O14647 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
CHD2O14647 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.42■■■□□ 2.62
CHD2O14647 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.42■■■□□ 2.62
CHD2O14647 MFSD11-216ENST00000590393 1141 ntBASIC31.42■■■□□ 2.62
CHD2O14647 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.42■■■□□ 2.62
CHD2O14647 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD2O14647 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD2O14647 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD2O14647 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD2O14647 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD2O14647 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.42■■■□□ 2.62
CHD2O14647 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
CHD2O14647 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD2O14647 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD2O14647 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC31.41■■■□□ 2.62
CHD2O14647 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD2O14647 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD2O14647 KRT18P11-201ENST00000435214 1283 ntBASIC31.41■■■□□ 2.62
CHD2O14647 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.41■■■□□ 2.62
CHD2O14647 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CHD2O14647 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD2O14647 GPX1P1-201ENST00000388829 606 ntBASIC31.4■■■□□ 2.62
CHD2O14647 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.4■■■□□ 2.62
CHD2O14647 RARA-203ENST00000394086 2008 ntTSL 2 BASIC31.4■■■□□ 2.62
CHD2O14647 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.4■■■□□ 2.62
CHD2O14647 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.4■■■□□ 2.62
CHD2O14647 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.4■■■□□ 2.62
CHD2O14647 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.4■■■□□ 2.62
CHD2O14647 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
CHD2O14647 MIR4651-201ENST00000582622 73 ntBASIC31.4■■■□□ 2.62
CHD2O14647 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHD2O14647 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC31.4■■■□□ 2.62
CHD2O14647 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHD2O14647 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHD2O14647 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC31.39■■■□□ 2.62
CHD2O14647 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.39■■■□□ 2.62
CHD2O14647 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
CHD2O14647 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CHD2O14647 KRT18P6-201ENST00000555540 1265 ntBASIC31.39■■■□□ 2.62
CHD2O14647 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD2O14647 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
CHD2O14647 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
CHD2O14647 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC31.38■■■□□ 2.61
CHD2O14647 AC011767.1-201ENST00000617410 1153 ntBASIC31.38■■■□□ 2.61
CHD2O14647 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
CHD2O14647 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD2O14647 BX005040.4-201ENST00000637145 1518 ntBASIC31.38■■■□□ 2.61
CHD2O14647 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD2O14647 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC31.38■■■□□ 2.61
CHD2O14647 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD2O14647 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD2O14647 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD2O14647 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CHD2O14647 AC144652.1-201ENST00000609974 1624 ntBASIC31.37■■■□□ 2.61
CHD2O14647 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD2O14647 TSPY20P-201ENST00000450910 630 ntBASIC31.37■■■□□ 2.61
CHD2O14647 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.37■■■□□ 2.61
CHD2O14647 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
CHD2O14647 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHD2O14647 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CHD2O14647 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC31.36■■■□□ 2.61
CHD2O14647 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC31.36■■■□□ 2.61
CHD2O14647 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.36■■■□□ 2.61
CHD2O14647 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD2O14647 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD2O14647 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
CHD2O14647 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CHD2O14647 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD2O14647 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD2O14647 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD2O14647 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CHD2O14647 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CHD2O14647 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD2O14647 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD2O14647 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD2O14647 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CHD2O14647 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
CHD2O14647 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHD2O14647 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CHD2O14647 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.33■■■□□ 2.61
CHD2O14647 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHD2O14647 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.33■■■□□ 2.61
CHD2O14647 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHD2O14647 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
CHD2O14647 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
CHD2O14647 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC31.32■■■□□ 2.6
CHD2O14647 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.32■■■□□ 2.6
CHD2O14647 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHD2O14647 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CHD2O14647 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHD2O14647 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
CHD2O14647 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
CHD2O14647 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
CHD2O14647 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.31■■■□□ 2.6
CHD2O14647 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
CHD2O14647 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.3■■■□□ 2.6
CHD2O14647 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD2O14647 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms