Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KPNA4O00629 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KPNA4O00629 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KPNA4O00629 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.59■□□□□ 0.89
KPNA4O00629 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KPNA4O00629 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KPNA4O00629 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.58■□□□□ 0.89
KPNA4O00629 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KPNA4O00629 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KPNA4O00629 GUSBP5-202ENST00000510805 1989 ntBASIC20.58■□□□□ 0.89
KPNA4O00629 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KPNA4O00629 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
KPNA4O00629 ECEL1P1-201ENST00000373592 1742 ntBASIC20.58■□□□□ 0.88
KPNA4O00629 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
KPNA4O00629 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
KPNA4O00629 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KPNA4O00629 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KPNA4O00629 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
KPNA4O00629 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KPNA4O00629 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KPNA4O00629 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KPNA4O00629 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.57■□□□□ 0.88
KPNA4O00629 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KPNA4O00629 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KPNA4O00629 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.57■□□□□ 0.88
KPNA4O00629 AC103724.3-201ENST00000564481 992 ntBASIC20.57■□□□□ 0.88
KPNA4O00629 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
KPNA4O00629 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KPNA4O00629 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.57■□□□□ 0.88
KPNA4O00629 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.57■□□□□ 0.88
KPNA4O00629 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
KPNA4O00629 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KPNA4O00629 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KPNA4O00629 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KPNA4O00629 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KPNA4O00629 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KPNA4O00629 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
KPNA4O00629 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.56■□□□□ 0.88
KPNA4O00629 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KPNA4O00629 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KPNA4O00629 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KPNA4O00629 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.56■□□□□ 0.88
KPNA4O00629 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KPNA4O00629 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
KPNA4O00629 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KPNA4O00629 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
KPNA4O00629 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
KPNA4O00629 AC004448.1-201ENST00000458332 883 ntBASIC20.55■□□□□ 0.88
KPNA4O00629 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
KPNA4O00629 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.55■□□□□ 0.88
KPNA4O00629 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.55■□□□□ 0.88
KPNA4O00629 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KPNA4O00629 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
KPNA4O00629 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KPNA4O00629 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KPNA4O00629 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KPNA4O00629 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.54■□□□□ 0.88
KPNA4O00629 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KPNA4O00629 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KPNA4O00629 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.54■□□□□ 0.88
KPNA4O00629 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KPNA4O00629 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KPNA4O00629 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.54■□□□□ 0.88
KPNA4O00629 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
KPNA4O00629 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KPNA4O00629 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KPNA4O00629 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KPNA4O00629 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.53■□□□□ 0.88
KPNA4O00629 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.53■□□□□ 0.88
KPNA4O00629 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KPNA4O00629 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KPNA4O00629 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.52■□□□□ 0.88
KPNA4O00629 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KPNA4O00629 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KPNA4O00629 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
KPNA4O00629 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KPNA4O00629 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.52■□□□□ 0.88
KPNA4O00629 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.52■□□□□ 0.88
KPNA4O00629 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KPNA4O00629 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KPNA4O00629 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KPNA4O00629 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
KPNA4O00629 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KPNA4O00629 AL031848.2-201ENST00000607670 837 ntBASIC20.51■□□□□ 0.87
KPNA4O00629 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.51■□□□□ 0.87
KPNA4O00629 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KPNA4O00629 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.51■□□□□ 0.87
KPNA4O00629 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KPNA4O00629 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms