Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.68■■□□□ 1.06
EIF3FO00303 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3FO00303 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3FO00303 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3FO00303 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3FO00303 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.68■■□□□ 1.06
EIF3FO00303 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3FO00303 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.68■■□□□ 1.06
EIF3FO00303 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3FO00303 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3FO00303 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3FO00303 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
EIF3FO00303 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EIF3FO00303 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EIF3FO00303 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.67■■□□□ 1.06
EIF3FO00303 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.67■■□□□ 1.06
EIF3FO00303 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EIF3FO00303 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
EIF3FO00303 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
EIF3FO00303 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.66■■□□□ 1.06
EIF3FO00303 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.66■■□□□ 1.06
EIF3FO00303 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EIF3FO00303 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EIF3FO00303 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EIF3FO00303 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.66■■□□□ 1.06
EIF3FO00303 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.66■■□□□ 1.06
EIF3FO00303 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.66■■□□□ 1.06
EIF3FO00303 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.66■■□□□ 1.06
EIF3FO00303 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.66■■□□□ 1.06
EIF3FO00303 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.66■■□□□ 1.06
EIF3FO00303 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EIF3FO00303 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EIF3FO00303 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EIF3FO00303 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EIF3FO00303 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EIF3FO00303 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EIF3FO00303 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
EIF3FO00303 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EIF3FO00303 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EIF3FO00303 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.65■■□□□ 1.06
EIF3FO00303 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
EIF3FO00303 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
EIF3FO00303 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.65■■□□□ 1.06
EIF3FO00303 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EIF3FO00303 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
EIF3FO00303 AC099791.2-201ENST00000605725 427 ntBASIC21.65■■□□□ 1.06
EIF3FO00303 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.65■■□□□ 1.06
EIF3FO00303 AC127496.7-201ENST00000625110 1798 ntBASIC21.65■■□□□ 1.06
EIF3FO00303 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
EIF3FO00303 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EIF3FO00303 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EIF3FO00303 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
EIF3FO00303 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.64■■□□□ 1.06
EIF3FO00303 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
EIF3FO00303 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EIF3FO00303 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.64■■□□□ 1.05
EIF3FO00303 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EIF3FO00303 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
EIF3FO00303 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EIF3FO00303 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EIF3FO00303 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.64■■□□□ 1.05
EIF3FO00303 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.64■■□□□ 1.05
EIF3FO00303 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.64■■□□□ 1.05
EIF3FO00303 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
EIF3FO00303 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EIF3FO00303 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EIF3FO00303 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EIF3FO00303 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.63■■□□□ 1.05
EIF3FO00303 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EIF3FO00303 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EIF3FO00303 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
EIF3FO00303 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EIF3FO00303 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.63■■□□□ 1.05
EIF3FO00303 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3FO00303 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3FO00303 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3FO00303 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3FO00303 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3FO00303 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3FO00303 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3FO00303 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.62■■□□□ 1.05
EIF3FO00303 AC131281.2-201ENST00000520478 145 ntBASIC21.62■■□□□ 1.05
EIF3FO00303 DUX4L19-201ENST00000557448 1267 ntBASIC21.62■■□□□ 1.05
EIF3FO00303 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3FO00303 AC233723.2-201ENST00000623798 2106 ntBASIC21.62■■□□□ 1.05
EIF3FO00303 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
EIF3FO00303 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
EIF3FO00303 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
EIF3FO00303 AC004687.1-201ENST00000579003 1625 ntBASIC21.62■■□□□ 1.05
EIF3FO00303 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
EIF3FO00303 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.61■■□□□ 1.05
EIF3FO00303 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.61■■□□□ 1.05
EIF3FO00303 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.61■■□□□ 1.05
EIF3FO00303 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3FO00303 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.61■■□□□ 1.05
EIF3FO00303 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3FO00303 AC006455.2-201ENST00000429931 906 ntBASIC21.61■■□□□ 1.05
EIF3FO00303 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.61■■□□□ 1.05
EIF3FO00303 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EIF3FO00303 pRNA.6-201ENST00000610482 90 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms