Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TRABD2BA6NFA1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
TRABD2BA6NFA1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRABD2BA6NFA1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRABD2BA6NFA1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.32■■□□□ 1
TRABD2BA6NFA1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
TRABD2BA6NFA1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRABD2BA6NFA1 AC066615.1-201ENST00000640911 628 ntBASIC21.32■■□□□ 1
TRABD2BA6NFA1 AC105233.4-201ENST00000642045 216 ntBASIC21.32■■□□□ 1
TRABD2BA6NFA1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRABD2BA6NFA1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRABD2BA6NFA1 SLC6A10P-202ENST00000431994 2058 ntBASIC21.32■■□□□ 1
TRABD2BA6NFA1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TRABD2BA6NFA1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.31■■□□□ 1
TRABD2BA6NFA1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.31■■□□□ 1
TRABD2BA6NFA1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.31■■□□□ 1
TRABD2BA6NFA1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRABD2BA6NFA1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TRABD2BA6NFA1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRABD2BA6NFA1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRABD2BA6NFA1 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 BID-214ENST00000617586 542 ntTSL 5 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRABD2BA6NFA1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRABD2BA6NFA1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRABD2BA6NFA1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.29■■□□□ 1
TRABD2BA6NFA1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRABD2BA6NFA1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.29■■□□□ 1
TRABD2BA6NFA1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.29■■□□□ 1
TRABD2BA6NFA1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.29■■□□□ 1
TRABD2BA6NFA1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 CROCCP5-201ENST00000436658 830 ntBASIC21.29■■□□□ 1
TRABD2BA6NFA1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.29■■□□□ 1
TRABD2BA6NFA1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.29■■□□□ 1
TRABD2BA6NFA1 MIR6089-201ENST00000616698 64 ntBASIC21.29■■□□□ 1
TRABD2BA6NFA1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRABD2BA6NFA1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRABD2BA6NFA1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRABD2BA6NFA1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRABD2BA6NFA1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRABD2BA6NFA1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
TRABD2BA6NFA1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRABD2BA6NFA1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRABD2BA6NFA1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.27■■□□□ 1
TRABD2BA6NFA1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.27■■□□□ 1
TRABD2BA6NFA1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRABD2BA6NFA1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRABD2BA6NFA1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRABD2BA6NFA1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.27■■□□□ 1
TRABD2BA6NFA1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRABD2BA6NFA1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRABD2BA6NFA1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRABD2BA6NFA1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRABD2BA6NFA1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRABD2BA6NFA1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TRABD2BA6NFA1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 NCF1B-203ENST00000435988 1254 ntBASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 OR2I1P-207ENST00000453522 948 ntBASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
TRABD2BA6NFA1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms