Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 MIR6084-201ENST00000622012 110 ntBASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3L4A6NDZ8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 AL031602.1-201ENST00000633169 911 ntBASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 AC068587.7-201ENST00000641602 218 ntBASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 AC004687.1-201ENST00000579003 1625 ntBASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3L4A6NDZ8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD3L4A6NDZ8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3L4A6NDZ8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MBD3L4A6NDZ8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD3L4A6NDZ8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3L4A6NDZ8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3L4A6NDZ8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3L4A6NDZ8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3L4A6NDZ8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD3L4A6NDZ8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
MBD3L4A6NDZ8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
MBD3L4A6NDZ8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.58■□□□□ 0.73
MBD3L4A6NDZ8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3L4A6NDZ8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3L4A6NDZ8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3L4A6NDZ8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.58■□□□□ 0.73
MBD3L4A6NDZ8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3L4A6NDZ8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.58■□□□□ 0.72
MBD3L4A6NDZ8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
MBD3L4A6NDZ8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.58■□□□□ 0.72
MBD3L4A6NDZ8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.58■□□□□ 0.72
MBD3L4A6NDZ8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.58■□□□□ 0.72
MBD3L4A6NDZ8 AC105233.4-201ENST00000642045 216 ntBASIC19.58■□□□□ 0.72
MBD3L4A6NDZ8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3L4A6NDZ8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3L4A6NDZ8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 DUX4L2-201ENST00000561772 1275 ntBASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 DUX4L6-201ENST00000626483 1275 ntBASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 DUX4L1-201ENST00000627662 1275 ntBASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 DUX4L8-201ENST00000629013 1275 ntBASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 DUX4L3-201ENST00000630187 1275 ntBASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 DUX4L7-201ENST00000630678 1275 ntBASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 DUX4L5-201ENST00000630834 1275 ntBASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3L4A6NDZ8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L4A6NDZ8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms