Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 KRT18P5-201ENST00000436075 1291 ntBASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 AC022517.1-201ENST00000592429 346 ntBASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.6■■□□□ 1.21
TBC1D3BA6NDS4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.59■■□□□ 1.21
TBC1D3BA6NDS4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.59■■□□□ 1.21
TBC1D3BA6NDS4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.59■■□□□ 1.21
TBC1D3BA6NDS4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TBC1D3BA6NDS4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
TBC1D3BA6NDS4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.59■■□□□ 1.21
TBC1D3BA6NDS4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.59■■□□□ 1.21
TBC1D3BA6NDS4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TBC1D3BA6NDS4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TBC1D3BA6NDS4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TBC1D3BA6NDS4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TBC1D3BA6NDS4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TBC1D3BA6NDS4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TBC1D3BA6NDS4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TBC1D3BA6NDS4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TBC1D3BA6NDS4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TBC1D3BA6NDS4 AC079630.1-202ENST00000618127 1840 ntBASIC22.58■■□□□ 1.21
TBC1D3BA6NDS4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TBC1D3BA6NDS4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.58■■□□□ 1.2
TBC1D3BA6NDS4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TBC1D3BA6NDS4 AL139125.2-201ENST00000623134 1869 ntBASIC22.58■■□□□ 1.2
TBC1D3BA6NDS4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TBC1D3BA6NDS4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TBC1D3BA6NDS4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 CCDC92B-201ENST00000575506 885 ntBASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 AC105233.4-201ENST00000642045 216 ntBASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.57■■□□□ 1.2
TBC1D3BA6NDS4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 IKBKGP1-201ENST00000612193 1073 ntBASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TBC1D3BA6NDS4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3BA6NDS4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3BA6NDS4 LINC02228-203ENST00000641970 1355 ntBASIC22.55■■□□□ 1.2
TBC1D3BA6NDS4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3BA6NDS4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3BA6NDS4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3BA6NDS4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3BA6NDS4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3BA6NDS4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 AC004687.1-201ENST00000579003 1625 ntBASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 ABCB10P4-201ENST00000566803 2184 ntBASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3BA6NDS4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 KRT18P14-201ENST00000534205 1250 ntBASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
TBC1D3BA6NDS4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D3BA6NDS4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.52■■□□□ 1.2
TBC1D3BA6NDS4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.52■■□□□ 1.2
TBC1D3BA6NDS4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D3BA6NDS4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms