Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 AL353803.4-201ENST00000565882 1934 ntBASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MEIS3P1A6NDR6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MEIS3P1A6NDR6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 AL592293.1-201ENST00000502889 1188 ntBASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MEIS3P1A6NDR6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.91■□□□□ 0.62
MEIS3P1A6NDR6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 AC026310.3-201ENST00000625186 2373 ntBASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
MEIS3P1A6NDR6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MEIS3P1A6NDR6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms