Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.24■■□□□ 1.79
SSC5DA1L4H1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SSC5DA1L4H1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 AC026185.1-201ENST00000445748 174 ntBASIC26.23■■□□□ 1.79
SSC5DA1L4H1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
SSC5DA1L4H1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SSC5DA1L4H1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SSC5DA1L4H1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SSC5DA1L4H1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.22■■□□□ 1.79
SSC5DA1L4H1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SSC5DA1L4H1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.22■■□□□ 1.79
SSC5DA1L4H1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
SSC5DA1L4H1 AC022211.4-201ENST00000625094 2161 ntBASIC26.21■■□□□ 1.79
SSC5DA1L4H1 LINC01529-204ENST00000636474 1715 ntBASIC26.21■■□□□ 1.79
SSC5DA1L4H1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SSC5DA1L4H1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SSC5DA1L4H1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.21■■□□□ 1.79
SSC5DA1L4H1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.21■■□□□ 1.79
SSC5DA1L4H1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.21■■□□□ 1.79
SSC5DA1L4H1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SSC5DA1L4H1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SSC5DA1L4H1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SSC5DA1L4H1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
SSC5DA1L4H1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SSC5DA1L4H1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
SSC5DA1L4H1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SSC5DA1L4H1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SSC5DA1L4H1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SSC5DA1L4H1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
SSC5DA1L4H1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SSC5DA1L4H1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
SSC5DA1L4H1 BID-214ENST00000617586 542 ntTSL 5 BASIC26.2■■□□□ 1.78
SSC5DA1L4H1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SSC5DA1L4H1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.19■■□□□ 1.78
SSC5DA1L4H1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SSC5DA1L4H1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SSC5DA1L4H1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SSC5DA1L4H1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SSC5DA1L4H1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SSC5DA1L4H1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SSC5DA1L4H1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SSC5DA1L4H1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SSC5DA1L4H1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SSC5DA1L4H1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SSC5DA1L4H1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SSC5DA1L4H1 AL355802.2-201ENST00000402069 882 ntBASIC26.17■■□□□ 1.78
SSC5DA1L4H1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.17■■□□□ 1.78
SSC5DA1L4H1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.17■■□□□ 1.78
SSC5DA1L4H1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SSC5DA1L4H1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SSC5DA1L4H1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SSC5DA1L4H1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SSC5DA1L4H1 MIR663A-201ENST00000385250 93 ntBASIC26.16■■□□□ 1.78
SSC5DA1L4H1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.16■■□□□ 1.78
SSC5DA1L4H1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SSC5DA1L4H1 AP003733.4-201ENST00000623785 1697 ntBASIC26.16■■□□□ 1.78
SSC5DA1L4H1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SSC5DA1L4H1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SSC5DA1L4H1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.16■■□□□ 1.78
SSC5DA1L4H1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.16■■□□□ 1.78
SSC5DA1L4H1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
SSC5DA1L4H1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SSC5DA1L4H1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SSC5DA1L4H1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
SSC5DA1L4H1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.15■■□□□ 1.78
SSC5DA1L4H1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SSC5DA1L4H1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms