Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 AP005435.1-201ENST00000529293 1178 ntBASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 AL139125.2-201ENST00000623134 1869 ntBASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 AC010525.1-201ENST00000585559 441 ntBASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 AL354811.1-201ENST00000610286 706 ntBASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV10A0A0B4J240 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 YBX1P1-201ENST00000445822 960 ntBASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 AC012414.1-201ENST00000556676 535 ntBASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV10A0A0B4J240 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV10A0A0B4J240 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 AC034268.1-201ENST00000441047 882 ntBASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 AL162430.1-201ENST00000480705 870 ntBASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 AC079630.1-202ENST00000618127 1840 ntBASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV10A0A0B4J240 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 AC027612.3-201ENST00000413684 1047 ntBASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 AC068587.7-201ENST00000641602 218 ntBASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV10A0A0B4J240 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms