Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 AL499627.2-201ENST00000606283 725 ntBASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 AL512631.2-201ENST00000604634 923 ntBASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 AC133561.1-201ENST00000568600 2415 ntBASIC17.17■□□□□ 0.34
TRBV7-1A0A0A6YYK4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 AC099791.2-201ENST00000605725 427 ntBASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 C1orf229-201ENST00000623686 2258 ntBASIC17.16■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 DUX4L19-201ENST00000557448 1267 ntBASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TRBV7-1A0A0A6YYK4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-1A0A0A6YYK4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AC004687.1-201ENST00000579003 1625 ntBASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms