Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FRMPD2B-201ENST00000431305 1347 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AL031587.5-201ENST00000624344 1849 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 DBIL5P-203ENST00000536214 2677 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AL162615.1-201ENST00000429893 1653 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AL627231.1-201ENST00000394467 1125 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 LINC00265-2P-201ENST00000413372 782 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 PDIA3P2-201ENST00000428073 158 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 Z97180.1-201ENST00000445173 988 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AC005077.3-201ENST00000449614 213 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AL353637.1-201ENST00000451571 732 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AC105129.2-201ENST00000559536 390 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 RN7SL574P-201ENST00000581512 297 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 CU633904.3-201ENST00000624042 1029 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 AC128714.1-201ENST00000637035 887 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 DGKZP1-201ENST00000378718 2776 ntBASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
AMBRA1Q9C0C7 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AC005154.3-201ENST00000419639 1393 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AC009108.4-201ENST00000623284 2451 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 MIR645-201ENST00000385283 94 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 GGTLC4P-201ENST00000402176 664 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 RPS2P36-201ENST00000456516 831 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms