Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 CES1P1-201ENST00000421606 1704 ntBASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 CA6-203ENST00000377443 1319 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 BPIFB9P-201ENST00000246222 1178 ntBASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 MIR602-201ENST00000384960 98 ntBASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 DMKN-202ENST00000392206 458 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 LINC01503-201ENST00000423122 545 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 OR7E33P-201ENST00000437705 966 ntBASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 AL132709.1-202ENST00000448840 588 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 AP000911.1-204ENST00000533091 571 ntTSL 4 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 AC074052.1-201ENST00000567734 456 ntBASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 GALNTL6-207ENST00000616459 1254 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 IMPDH1P8-201ENST00000413639 1525 ntBASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 ANXA13-202ENST00000419625 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 MKRN5P-201ENST00000445263 1467 ntBASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 TSTA3-210ENST00000529064 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 AL590683.1-201ENST00000439059 1849 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 MAGEA9B-203ENST00000595065 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDC42BPAQ5VT25 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 ARF1P2-201ENST00000392493 538 ntBASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 RNF7-202ENST00000393000 805 ntTSL 2 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 GPAT2P2-201ENST00000445404 863 ntBASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 RN7SL340P-201ENST00000470792 296 ntBASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 RPL30-213ENST00000523172 274 ntTSL 5 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 EEF1DP8-201ENST00000534760 536 ntBASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 MIR4459-201ENST00000581837 66 ntBASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
CDC42BPAQ5VT25 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 AC073263.2-201ENST00000624835 1863 ntBASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 CD1C-201ENST00000368170 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 AC124944.3-201ENST00000607976 1304 ntBASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 PLP2-201ENST00000376322 620 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 SRSF9P1-201ENST00000399149 530 ntBASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 CST13P-202ENST00000400563 1157 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 AL357055.2-201ENST00000412567 434 ntBASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 TMX3-202ENST00000443099 913 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 DDTP1-201ENST00000443589 383 ntBASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDC42BPAQ5VT25 AC073655.1-201ENST00000550111 493 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms