Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 U62317.3-201ENST00000608319 855 ntBASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 AL031673.1-201ENST00000611460 466 ntBASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AMBRA1Q9C0C7 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 PPP1R2P4-201ENST00000424051 595 ntBASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 EEF1DP2-201ENST00000433698 843 ntBASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AL133466.1-201ENST00000447582 150 ntBASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 RN7SL769P-201ENST00000469386 295 ntBASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 MIR7845-201ENST00000618396 99 ntBASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AC091812.3-201ENST00000621362 345 ntBASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AC080013.1-204ENST00000607426 2185 ntBASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.63□□□□□ -0.39
AMBRA1Q9C0C7 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms