Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.79□□□□□ -0.36
SCN2BO60939 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.79□□□□□ -0.36
SCN2BO60939 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SCN2BO60939 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.78□□□□□ -0.36
SCN2BO60939 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.78□□□□□ -0.36
SCN2BO60939 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SCN2BO60939 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SCN2BO60939 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SCN2BO60939 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
SCN2BO60939 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.78□□□□□ -0.36
SCN2BO60939 AL512306.1-201ENST00000432698 848 ntBASIC12.78□□□□□ -0.36
SCN2BO60939 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.78□□□□□ -0.36
SCN2BO60939 RN7SL564P-201ENST00000496309 250 ntBASIC12.78□□□□□ -0.36
SCN2BO60939 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.78□□□□□ -0.36
SCN2BO60939 SNORD3B-1-201ENST00000577988 758 ntBASIC12.78□□□□□ -0.36
SCN2BO60939 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.78□□□□□ -0.36
SCN2BO60939 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SCN2BO60939 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
SCN2BO60939 AL009176.1-201ENST00000607876 650 ntBASIC12.78□□□□□ -0.36
SCN2BO60939 AL353770.1-201ENST00000614915 403 ntBASIC12.78□□□□□ -0.36
SCN2BO60939 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC12.78□□□□□ -0.36
SCN2BO60939 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.78□□□□□ -0.36
SCN2BO60939 AC118758.2-201ENST00000614242 2813 ntBASIC12.78□□□□□ -0.36
SCN2BO60939 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SCN2BO60939 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCN2BO60939 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SCN2BO60939 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCN2BO60939 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC12.77□□□□□ -0.36
SCN2BO60939 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SCN2BO60939 AC131902.2-201ENST00000566892 2172 ntBASIC12.77□□□□□ -0.36
SCN2BO60939 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12.77□□□□□ -0.36
SCN2BO60939 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCN2BO60939 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SCN2BO60939 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
SCN2BO60939 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
SCN2BO60939 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SCN2BO60939 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCN2BO60939 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCN2BO60939 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SCN2BO60939 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCN2BO60939 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 OR52M2P-201ENST00000414298 959 ntBASIC12.77□□□□□ -0.37
SCN2BO60939 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms