Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 ENPP7P8-202ENST00000527856 1345 ntBASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AP003969.2-201ENST00000623739 2275 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 LILRP2-202ENST00000413572 1383 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 NHP2P1-201ENST00000335274 462 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 KRT19P4-201ENST00000443208 943 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 HNRNPA3P6-201ENST00000472163 1006 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AP000920.1-201ENST00000531824 344 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AL590235.1-201ENST00000564650 861 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AC018846.1-201ENST00000568231 183 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 KRT18P8-201ENST00000581937 1246 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 PRMT1P1-201ENST00000604252 1009 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AC123912.6-201ENST00000612657 315 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AL591424.3-201ENST00000614278 872 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 AC008536.3-201ENST00000623282 1599 ntBASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHKBP1Q8TBC3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 AP000437.1-201ENST00000624057 2085 ntBASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 MIR632-201ENST00000385193 94 ntBASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 AL157823.1-201ENST00000403727 628 ntBASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 SDCBP2P1-201ENST00000416115 614 ntBASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 AL137244.1-201ENST00000422931 865 ntBASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 RNU1-80P-201ENST00000459500 161 ntBASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 AC010202.1-201ENST00000551181 405 ntBASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 AC004899.2-201ENST00000622993 3860 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms