Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 NOS2P3-201ENST00000411468 867 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC14.07□□□□□ -0.16
MTHFRP42898 CRIP1P2-201ENST00000425396 228 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 NOS2P2-201ENST00000426269 867 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 IQCF4-203ENST00000428561 420 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 AC010997.1-201ENST00000447646 350 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 FAM86JP-202ENST00000484500 988 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC14.07□□□□□ -0.16
MTHFRP42898 HNRNPA1P4-201ENST00000509706 756 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 AC090820.1-201ENST00000519722 591 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
MTHFRP42898 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC14.07□□□□□ -0.16
MTHFRP42898 ABCD1P3-201ENST00000562927 605 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 RPS5-205ENST00000598495 800 ntTSL 3 BASIC14.07□□□□□ -0.16
MTHFRP42898 OR3A1-202ENST00000615105 966 ntBASIC14.07□□□□□ -0.16
MTHFRP42898 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC14.07□□□□□ -0.16
MTHFRP42898 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC14.07□□□□□ -0.16
MTHFRP42898 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MTHFRP42898 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MTHFRP42898 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
MTHFRP42898 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MTHFRP42898 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MTHFRP42898 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
MTHFRP42898 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MTHFRP42898 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MTHFRP42898 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC14.06□□□□□ -0.16
MTHFRP42898 RBMX2P5-201ENST00000424312 969 ntBASIC14.06□□□□□ -0.16
MTHFRP42898 RN7SL794P-201ENST00000469816 280 ntBASIC14.06□□□□□ -0.16
MTHFRP42898 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC14.06□□□□□ -0.16
MTHFRP42898 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 KRT18P42-201ENST00000505048 1255 ntBASIC14.06□□□□□ -0.16
MTHFRP42898 OR52V1P-201ENST00000515557 898 ntBASIC14.06□□□□□ -0.16
MTHFRP42898 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC14.06□□□□□ -0.16
MTHFRP42898 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC14.06□□□□□ -0.16
MTHFRP42898 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC14.06□□□□□ -0.16
MTHFRP42898 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC14.06□□□□□ -0.16
MTHFRP42898 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC14.06□□□□□ -0.16
MTHFRP42898 AL512324.3-201ENST00000619383 882 ntBASIC14.06□□□□□ -0.16
MTHFRP42898 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MTHFRP42898 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.06□□□□□ -0.16
MTHFRP42898 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.06□□□□□ -0.16
MTHFRP42898 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 AC020763.3-201ENST00000625095 2904 ntBASIC14.06□□□□□ -0.16
MTHFRP42898 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.06□□□□□ -0.16
MTHFRP42898 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
MTHFRP42898 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MTHFRP42898 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MTHFRP42898 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.05□□□□□ -0.16
MTHFRP42898 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
MTHFRP42898 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MTHFRP42898 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
MTHFRP42898 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms