Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 DNM1P51-201ENST00000558149 522 ntBASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 TYMSP2-201ENST00000589501 424 ntBASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 AP000769.1-203ENST00000637245 208 ntBASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 AC108024.1-201ENST00000626286 1721 ntBASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 AC005562.1-201ENST00000583030 3219 ntBASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 AL445209.1-201ENST00000607269 3491 ntBASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 AC006548.2-201ENST00000605217 529 ntBASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 AC126755.5-201ENST00000622756 267 ntBASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 AC004623.1-201ENST00000624592 2127 ntBASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms